Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15153 and 15154 are separated by 349 nucleotides15154 and 15155 are separated by 143 nucleotides15155 and 15156 are separated by 169 nucleotides15156 and 15157 are separated by 123 nucleotides mRNA_6785: 15153 - K03860 PIGQ, GPI1 phosphatidylinositol glycan, class Q, at 123,273 to 125,638 15153 mRNA_6786: 15154 - K14784 CMS1 protein CMS1, at 125,988 to 127,224 15154 mRNA_6787: 15155 - HMMPfam-Mitochondrial ribosomal protein L31-PF09784, at 127,368 to 127,805 15155 mRNA_6788: 15156 - K05853 ATP2A Ca2+ transporting ATPase, sarcoplasmic/endoplasmic reticulum, at 127,975 to 131,651 15156 mRNA_6789: 15157 - KOG3335 Predicted coiled-coil protein, at 131,775 to 132,958 15157
Group Condition mRNA_6785 mRNA_6786 mRNA_6787 mRNA_6788 mRNA_6789
15153 15154 15155 15156 15157
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -1.8 N.D. -0.6 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -2.2 N.D. -0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -2.7 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -1.1 N.D. -0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.9 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -1.4 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.8 N.D. -0.6 N.D.
auxotrophy Dropout Complete +0.3 -1.4 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -1.5 N.D. +0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.1 -1.1 N.D. +0.4 N.D.
growth on ypd YPD -0.3 -0.6 N.D. +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.6 N.D. -0.1 N.D.
growth on oleic acid YNB Glucose +0.2 -0.9 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.4 N.D. -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.2 N.D. -0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.3 N.D. +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.3 N.D. -0.1 N.D.
auxotrophy YNB Glucose +0.2 -0.2 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.2 +0.2 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.6 N.D. +0.3 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +1.3 N.D. -0.2 N.D.
remove
mRNA_6785
plot		 remove
mRNA_6786
plot		 remove
mRNA_6787		 remove
mRNA_6788
plot		 remove
mRNA_6789
plot