Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15157 and 15158 are separated by 524 nucleotides15158 and 15159 are separated by 92 nucleotides15159 and 15160 are separated by 367 nucleotides15160 and 15161 are separated by 107 nucleotides mRNA_6789: 15157 - KOG3335 Predicted coiled-coil protein, at 131,775 to 132,958 15157 mRNA_6790: 15158 - K00671 E2.3.1.97, NMT glycylpeptide N-tetradecanoyltransferase, at 133,483 to 136,016 15158 mRNA_6791: 15159 - K00888 PI4KA phosphatidylinositol 4-kinase A, at 136,109 to 143,352 15159 mRNA_6792: 15160 - K14396 PABPN1, PABP2 polyadenylate-binding protein 2, at 143,720 to 144,685 15160 mRNA_6793: 15161 - KOG2375 Protein interacting with poly(A)-binding protein, at 144,793 to 148,155 15161
Group Condition mRNA_6789 mRNA_6790 mRNA_6791 mRNA_6792 mRNA_6793
15157 15158 15159 15160 15161
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.5 -0.0 -3.3
growth on ypd YPD N.D. N.D. -1.6 -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.7 -0.2 -0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -1.9 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.8 -0.0 -0.7
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.7 -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.4 -0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.4 -0.2 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.3 -0.5 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -0.9 -0.0 +0.5
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.7 +0.2 +0.0
auxotrophy Dropout Complete N.D. N.D. -0.5 +0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.2 -0.4 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.6 -0.1 +0.9
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.1 +0.3 +0.2
auxotrophy YNB Glucose N.D. N.D. +0.4 +0.3 +0.3
growth on oleic acid YNB Glucose N.D. N.D. +0.6 +0.5 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.1 +0.3 +1.5
growth on ricinoleic acid YNB Glucose N.D. N.D. +1.4 +0.3 +0.4
growth on oleic acid YNB Oleic Acid N.D. N.D. +1.2 +0.6 +1.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +1.3 +0.7 +1.6
remove
mRNA_6789
plot
remove
mRNA_6790
plot
remove
mRNA_6791
remove
mRNA_6792
plot
remove
mRNA_6793
plot