Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15160 and 15161 are separated by 107 nucleotides15161 and 15162 are separated by 316 nucleotides15162 and 15163 are separated by 104 nucleotides15163 and 15164 are separated by 780 nucleotides mRNA_6792: 15160 - K14396 PABPN1, PABP2 polyadenylate-binding protein 2, at 143,720 to 144,685 15160 mRNA_6793: 15161 - KOG2375 Protein interacting with poly(A)-binding protein, at 144,793 to 148,155 15161 mRNA_6794: 15162 - K10773 NTH endonuclease III, at 148,472 to 150,085 15162 mRNA_6795: 15163 - KOG3548 DNA damage checkpoint protein RHP9/CRB2/53BP1, at 150,190 to 154,769 15163 mRNA_6796: 15164 - Hypothetical Protein, at 155,550 to 156,068 15164
Group Condition mRNA_6792 mRNA_6793 mRNA_6794 mRNA_6795 mRNA_6796
15160 15161 15162 15163 15164
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -3.3 +0.7 +0.0 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.9 +0.2 -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.0 -0.3 +0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 -0.1 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.7 +0.6 -0.2 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.3 +0.2 +0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.2 -0.7 -0.4 +0.1
growth on ypd YPD -0.2 -0.2 +0.1 +0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.5 +0.1 +0.0 -0.5
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.0 -0.4 -0.1 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.4 +0.2 +0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 +0.4 -0.0 +0.0
auxotrophy Dropout Complete +0.2 +0.1 -0.2 +0.0 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.1 +0.5 +0.2 -0.2
auxotrophy YNB Glucose +0.3 +0.3 +0.0 -0.1 +0.3
growth on oleic acid YNB Glucose +0.5 +0.2 +0.1 -0.2 +0.2
growth on ricinoleic acid YNB Glucose +0.3 +0.4 +0.9 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.9 +0.8 +0.0 -0.1
growth on oleic acid YNB Oleic Acid +0.6 +1.0 -0.2 +0.0 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +1.5 +0.8 -0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.7 +1.6 +1.0 -0.1 +0.1
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