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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15162 and 15163 are separated by 104 nucleotides
15163 and 15164 are separated by 780 nucleotides
15164 and 15165 are separated by 237 nucleotides
15165 and 15166 are separated by 589 nucleotides
mRNA_6794: 15162 - K10773 NTH endonuclease III, at 148,472 to 150,085
15162
mRNA_6795: 15163 - KOG3548 DNA damage checkpoint protein RHP9/CRB2/53BP1, at 150,190 to 154,769
15163
mRNA_6796: 15164 - Hypothetical Protein, at 155,550 to 156,068
15164
mRNA_6797: 15165 - BLAST Formin-like protein 3 [Rhizoctonia solani], at 156,306 to 160,746
15165
mRNA_6798: 15166 - Hypothetical Protein, at 161,336 to 161,885
15166
Group
Condition
mRNA
_6794
mRNA
_6795
mRNA
_6796
mRNA
_6797
mRNA
_6798
15162
15163
15164
15165
15166
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
+0.0
-0.5
-0.6
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.2
-0.3
-1.2
+0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.7
-0.4
+0.1
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
-0.2
-0.5
-0.3
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.1
-0.7
-0.5
+0.8
growth on oleic acid
YNB Glucose
+0.1
-0.2
+0.2
-0.2
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
+0.2
-0.2
-0.3
-0.7
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.1
-0.2
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.1
+0.3
-0.1
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.1
-0.3
-0.2
+0.2
growth on ricinoleic acid
YNB Glucose
+0.9
-0.2
+0.1
-0.1
-0.7
auxotrophy
Dropout Complete
-0.2
+0.0
+0.4
+0.2
-0.3
growth on oleic acid
YNB Oleic Acid
-0.2
+0.0
+0.4
+0.3
-0.6
growth on ypd
YPD
+0.1
+0.2
-0.2
+0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
+0.0
-0.1
-0.0
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.8
-0.1
+0.0
-0.2
-0.6
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.0
+0.0
+0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.2
+0.2
-0.1
+0.2
-0.3
auxotrophy
YNB Glucose
+0.0
-0.1
+0.3
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.7
+0.0
-0.0
+0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.0
-0.1
+0.1
+0.1
-0.1
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