Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15167 and 15168 are separated by 168 nucleotides15168 and 15169 are separated by 878 nucleotides15169 and 15170 are separated by 286 nucleotides15170 and 15171 are separated by 91 nucleotides mRNA_6799: 15167 - K00033 PGD, gnd, gntZ 6-phosphogluconate dehydrogenase, at 163,328 to 165,722 15167 mRNA_6800: 15168 - K04709 LAG1 Acyl-CoA-dependent ceramide synthase, at 165,891 to 167,581 15168 mRNA_6801: 15169 - K15279 SLC35C1, FUCT1 solute carrier family 35 (GDP-fucose transporter), member C1, at 168,460 to 170,274 15169 mRNA_6802: 15170 - Hypothetical Protein, at 170,561 to 172,312 15170 mRNA_6803: 15171 - KOG3131 Uncharacterized conserved protein, at 172,404 to 173,557 15171
Group Condition mRNA_6799 mRNA_6800 mRNA_6801 mRNA_6802 mRNA_6803
15167 15168 15169 15170 15171
ypd buoyancy 40 hrs No Buoyancy Separation -1.7 -1.5 -0.6 -0.7 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -1.8 -1.7 +0.1 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -2.2 -0.2 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.2 -0.2 +0.7 -0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy -1.9 -0.3 -0.2 -0.1 +0.5
facs on lipid accumulation Sorted High BODIPY Gate -1.5 -0.9 +0.5 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 -0.1 +0.1 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 +0.1 +0.1 +0.0 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.2 -0.0 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.3 +0.0 -0.2 -0.4 +0.3
growth on oleic acid YNB Glucose +0.2 -0.3 +0.6 +0.2 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -1.4 +2.3 +0.3 +0.8
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.4 +0.6 -0.3 +0.3
growth on ypd YPD +1.5 -0.4 +0.2 +0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine +1.2 -0.3 +0.3 +0.4 +0.0
auxotrophy YNB Glucose 75mM Arginine +1.6 -0.1 +0.1 +0.3 +0.0
growth on oleic acid YNB Oleic Acid +0.0 +0.5 +1.5 -0.0 +0.4
growth on ricinoleic acid YNB Glucose +0.8 -0.1 +1.0 +0.3 +0.3
auxotrophy YNB Glucose +1.9 +0.2 +0.4 +0.3 -0.1
auxotrophy Dropout Complete +1.8 +1.0 +0.8 +0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.8 +1.6 +0.4 +1.0
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