Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15171 and 15172 are separated by 173 nucleotides15172 and 15173 are separated by 118 nucleotides15173 and 15174 are separated by 655 nucleotides15174 and 15175 are separated by 423 nucleotides mRNA_6803: 15171 - KOG3131 Uncharacterized conserved protein, at 172,404 to 173,557 15171 mRNA_6804: 15172 - HMMPfam-CFEM domain-PF05730, at 173,731 to 174,873 15172 mRNA_6805: 15173 - Hypothetical Protein, at 174,992 to 176,183 15173 mRNA_6806: 15174 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 176,839 to 177,908 15174 mRNA_6807: 15175 - HMMPfam-GRIP domain-PF01465,ProSiteProfiles-GRIP domain profile.-PS50913,SMART-golgin-97, RanBP2alpha,Imh1p and p230/golgin-245-SM00755, at 178,332 to 182,273 15175
Group Condition mRNA_6803 mRNA_6804 mRNA_6805 mRNA_6806 mRNA_6807
15171 15172 15173 15174 15175
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.1 -0.6 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.2 -0.0 N.D. +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 -0.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.0 -0.3 N.D. +0.2
growth on ypd YPD -0.3 -0.2 +0.1 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.0 -0.1 N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.3 +0.2 N.D. -0.2
auxotrophy YNB Glucose -0.1 +0.4 +0.1 N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.3 +0.3 N.D. -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.1 +0.0 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine +0.0 +0.2 +0.1 N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.0 +0.0 N.D. +0.1
auxotrophy Dropout Complete +0.0 +0.2 +0.1 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.3 +0.2 N.D. +0.0
growth on oleic acid YNB Glucose +0.3 -0.1 +0.0 N.D. +0.3
ypd buoyancy 40 hrs High Buoyancy +0.5 -0.1 +0.2 N.D. +0.1
growth on oleic acid YNB Oleic Acid +0.4 +0.0 +0.0 N.D. +0.4
growth on ricinoleic acid YNB Glucose +0.3 +0.1 +0.3 N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.0 +0.3 N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 -0.0 +0.1 N.D. +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid +1.0 +0.1 +0.4 N.D. +0.7
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