Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15177 and 15178 are separated by 352 nucleotides15178 and 15179 are separated by 241 nucleotides15179 and 15180 are separated by 284 nucleotides15180 and 15181 are separated by 451 nucleotides mRNA_6809: 15177 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383, at 191,872 to 193,044 15177 mRNA_6810: 15178 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 193,397 to 194,230 15178 mRNA_6811: 15179 - K03953 NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9, at 194,472 to 196,083 15179 mRNA_6812: 15180 - K00074 paaH, hbd, fadB, mmgB 3-hydroxybutyryl-CoA dehydrogenase, at 196,368 to 197,656 15180 mRNA_6813: 15181 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 198,108 to 198,984 15181
Group Condition mRNA_6809 mRNA_6810 mRNA_6811 mRNA_6812 mRNA_6813
15177 15178 15179 15180 15181
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.4 N.D. -0.6 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 -0.5 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.5 N.D. -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.2 N.D. -0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.6 +0.0 N.D. -0.0 +0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.4 N.D. +0.0 -0.0
growth on oleic acid YNB Oleic Acid -0.2 +0.1 N.D. -0.2 -0.1
growth on oleic acid YNB Glucose -0.3 +0.1 N.D. -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.3 N.D. +0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.2 N.D. +0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.4 N.D. +0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 N.D. +0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.4 N.D. +0.4 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.5 -0.1 N.D. -0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.1 N.D. +0.1 -0.1
auxotrophy YNB Glucose -0.2 +0.5 N.D. -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.3 N.D. -0.1 -0.4
auxotrophy Dropout Complete -0.3 +0.6 N.D. +0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.2 N.D. -0.2 +0.2
growth on ypd YPD -0.2 -0.0 N.D. -0.0 +0.6
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.4 N.D. +0.1 -0.2
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