Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15178 and 15179 are separated by 241 nucleotides15179 and 15180 are separated by 284 nucleotides15180 and 15181 are separated by 451 nucleotides15181 and 15182 are separated by 940 nucleotides mRNA_6810: 15178 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 193,397 to 194,230 15178 mRNA_6811: 15179 - K03953 NDUFA9 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9, at 194,472 to 196,083 15179 mRNA_6812: 15180 - K00074 paaH, hbd, fadB, mmgB 3-hydroxybutyryl-CoA dehydrogenase, at 196,368 to 197,656 15180 mRNA_6813: 15181 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 198,108 to 198,984 15181 mRNA_6814: 15182 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 199,925 to 200,316 15182
Group Condition mRNA_6810 mRNA_6811 mRNA_6812 mRNA_6813 mRNA_6814
15178 15179 15180 15181 15182
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 N.D. -0.1 +0.1 -0.7
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. -0.6 +0.1 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. +0.1 -0.1 -0.9
auxotrophy YNB Glucose 75mM Methionine +0.3 N.D. -0.1 -0.4 -0.8
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.4 -0.1 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. +0.1 -0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.4 N.D. +0.0 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 N.D. -0.1 +0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.1 -0.1 +0.1
auxotrophy Dropout Complete +0.6 N.D. +0.1 -0.1 -0.7
growth on oleic acid YNB Oleic Acid +0.1 N.D. -0.2 -0.1 +0.1
auxotrophy YNB Glucose +0.5 N.D. -0.2 -0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 N.D. +0.2 -0.2 -0.0
growth on oleic acid YNB Glucose +0.1 N.D. -0.1 -0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. +0.4 +0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 N.D. -0.2 +0.2 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 N.D. +0.1 -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.4 N.D. +0.2 +0.1 +0.4
growth on ricinoleic acid YNB Glucose +0.0 N.D. -0.0 +0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 N.D. +0.1 +0.2 -0.2
growth on ypd YPD -0.0 N.D. -0.0 +0.6 -0.1
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