Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15180 and 15181 are separated by 451 nucleotides
15181 and 15182 are separated by 940 nucleotides
15182 and 15183 are separated by 379 nucleotides
15183 and 15184 are separated by 171 nucleotides
mRNA_6812: 15180 - K00074 paaH, hbd, fadB, mmgB 3-hydroxybutyryl-CoA dehydrogenase, at 196,368 to 197,656
15180
mRNA_6813: 15181 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 198,108 to 198,984
15181
mRNA_6814: 15182 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 199,925 to 200,316
15182
mRNA_6815: 15183 - HMMPfam-PUB domain-PF09409,SUPERFAMILY--SSF143503, at 200,696 to 201,916
15183
mRNA_6816: 15184 - K02437 gcvH, GCSH glycine cleavage system H protein, at 202,088 to 202,810
15184
Group
Condition
mRNA
_6812
mRNA
_6813
mRNA
_6814
mRNA
_6815
mRNA
_6816
15180
15181
15182
15183
15184
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.4
-0.8
-0.2
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.1
-0.9
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.1
-0.7
-0.3
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.6
+0.1
-0.3
-0.3
N.D.
auxotrophy
Dropout Complete
+0.1
-0.1
-0.7
-0.3
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.1
-0.5
-0.1
N.D.
auxotrophy
YNB Glucose
-0.2
-0.1
-0.3
-0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.2
-0.2
-0.3
N.D.
growth on oleic acid
YNB Oleic Acid
-0.2
-0.1
+0.1
-0.1
N.D.
growth on oleic acid
YNB Glucose
-0.1
-0.1
+0.0
-0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.2
-0.2
-0.4
N.D.
growth on ricinoleic acid
YNB Glucose
-0.0
+0.2
+0.1
-0.5
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.0
-0.1
-0.1
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.3
-0.2
+0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.2
+0.1
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
+0.1
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
+0.0
+0.2
-0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.2
-0.0
+0.0
N.D.
growth on ypd
YPD
-0.0
+0.6
-0.1
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.1
+0.4
-0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
+0.2
-0.2
+0.5
N.D.
remove
mRNA_6812
plot
remove
mRNA_6813
plot
remove
mRNA_6814
remove
mRNA_6815
plot
remove
mRNA_6816
plot