Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 15181 and 15182 are separated by 940 nucleotides15182 and 15183 are separated by 379 nucleotides15183 and 15184 are separated by 171 nucleotides15184 and 15185 are separated by 253 nucleotides mRNA_6813: 15181 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 198,108 to 198,984 15181 mRNA_6814: 15182 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 199,925 to 200,316 15182 mRNA_6815: 15183 - HMMPfam-PUB domain-PF09409,SUPERFAMILY--SSF143503, at 200,696 to 201,916 15183 mRNA_6816: 15184 - K02437 gcvH, GCSH glycine cleavage system H protein, at 202,088 to 202,810 15184 mRNA_6817: 15185 - KOG3525 Subtilisin-like proprotein convertase, at 203,064 to 206,112 15185
Group Condition mRNA_6813 mRNA_6814 mRNA_6815 mRNA_6816 mRNA_6817
15181 15182 15183 15184 15185
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.8 -0.2 N.D. -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.9 -0.2 N.D. -0.2
auxotrophy Dropout Complete -0.1 -0.7 -0.3 N.D. -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.7 -0.3 N.D. -0.4
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 -0.3 N.D. -0.2
auxotrophy YNB Glucose -0.1 -0.3 -0.2 N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.5 -0.1 N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.2 -0.4 N.D. -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 -0.3 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.2 +0.2 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.1 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.1 +0.0 N.D. -0.4
growth on ricinoleic acid YNB Glucose +0.2 +0.1 -0.5 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.0 +0.0 N.D. -0.2
growth on oleic acid YNB Glucose -0.1 +0.0 -0.2 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.1 -0.2 N.D. -0.3
growth on oleic acid YNB Oleic Acid -0.1 +0.1 -0.1 N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.2 -0.2 N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.4 -0.1 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.2 +0.5 N.D. +0.1
growth on ypd YPD +0.6 -0.1 +0.1 N.D. +0.1
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