Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15186 and 15187 are separated by 171 nucleotides15187 and 15188 are separated by 202 nucleotides15188 and 15189 are separated by 184 nucleotides15189 and 15190 are separated by 325 nucleotides mRNA_6818: 15186 - KOG0729 26S proteasome regulatory complex, ATPase RPT1, at 206,564 to 206,841 15186 mRNA_6819: 15187 - SUPERFAMILY--SSF103107, at 207,013 to 207,504 15187 mRNA_6820: 15188 - K00931 proB glutamate 5-kinase, at 207,707 to 209,492 15188 mRNA_6821: 15189 - K07739 ELP3, KAT9 elongator complex protein 3, at 209,677 to 212,045 15189 mRNA_6822: 15190 - K20303 TRAPPC4, TRS23 trafficking protein particle complex subunit 4, at 212,371 to 212,952 15190
Group Condition mRNA_6818 mRNA_6819 mRNA_6820 mRNA_6821 mRNA_6822
15186 15187 15188 15189 15190
facs on lipid accumulation Sorted No BODIPY Gate -2.1 -0.3 N.D. -1.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -1.4 N.D. -0.9 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -1.9 -1.2 N.D. +0.6 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.6 N.D. -1.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.3 N.D. -0.8 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.7 -0.0 N.D. -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.4 N.D. -0.0 N.D.
growth on ypd YPD +0.2 -0.2 N.D. -0.2 N.D.
growth on oleic acid YNB Glucose -0.7 +0.6 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.3 N.D. -0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 +1.3 N.D. -0.8 N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.5 N.D. -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 +0.5 N.D. +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.4 N.D. +0.8 N.D.
auxotrophy YNB Glucose -0.3 +0.9 N.D. -0.0 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 +1.0 N.D. -0.0 N.D.
growth on oleic acid YNB Oleic Acid -0.8 +1.4 N.D. +0.1 N.D.
auxotrophy Dropout Complete -0.1 +1.1 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 +0.8 N.D. +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +1.5 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.2 +2.9 N.D. +0.4 N.D.
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