Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15187 and 15188 are separated by 202 nucleotides
15188 and 15189 are separated by 184 nucleotides
15189 and 15190 are separated by 325 nucleotides
15190 and 15191 are separated by 40 nucleotides
mRNA_6819: 15187 - SUPERFAMILY--SSF103107, at 207,013 to 207,504
15187
mRNA_6820: 15188 - K00931 proB glutamate 5-kinase, at 207,707 to 209,492
15188
mRNA_6821: 15189 - K07739 ELP3, KAT9 elongator complex protein 3, at 209,677 to 212,045
15189
mRNA_6822: 15190 - K20303 TRAPPC4, TRS23 trafficking protein particle complex subunit 4, at 212,371 to 212,952
15190
mRNA_6823: 15191 - BLAST TNFR/NGFR cysteine-rich region family protein [Rh..., at 212,993 to 213,573
15191
Group
Condition
mRNA
_6819
mRNA
_6820
mRNA
_6821
mRNA
_6822
mRNA
_6823
15187
15188
15189
15190
15191
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.4
N.D.
-0.9
N.D.
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
N.D.
-0.6
N.D.
-2.2
ypd buoyancy
40 hrs Low Buoyancy
-0.6
N.D.
-1.6
N.D.
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-1.2
N.D.
+0.6
N.D.
-1.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+1.3
N.D.
-0.8
N.D.
-2.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
N.D.
-1.0
N.D.
+0.4
growth on ypd
YPD
-0.2
N.D.
-0.2
N.D.
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
N.D.
-0.2
N.D.
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.4
N.D.
-0.0
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
N.D.
-0.8
N.D.
+0.9
growth on ricinoleic acid
YNB Glucose
+0.5
N.D.
-0.2
N.D.
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.4
N.D.
+0.8
N.D.
-0.2
growth on oleic acid
YNB Glucose
+0.6
N.D.
+0.1
N.D.
+0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
N.D.
+0.1
N.D.
+0.4
auxotrophy
YNB Glucose
+0.9
N.D.
-0.0
N.D.
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.5
N.D.
+0.1
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+1.0
N.D.
-0.0
N.D.
+0.8
growth on oleic acid
YNB Oleic Acid
+1.4
N.D.
+0.1
N.D.
+0.3
auxotrophy
Dropout Complete
+1.1
N.D.
-0.1
N.D.
+0.8
auxotrophy
YNB Glucose 75mM Arginine
+0.8
N.D.
+0.3
N.D.
+0.8
growth on ricinoleic acid
YNB Ricinoleic Acid
+2.9
N.D.
+0.4
N.D.
+0.1
remove
mRNA_6819
plot
remove
mRNA_6820
plot
remove
mRNA_6821
remove
mRNA_6822
plot
remove
mRNA_6823
plot