Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15188 and 15189 are separated by 184 nucleotides15189 and 15190 are separated by 325 nucleotides15190 and 15191 are separated by 40 nucleotides15191 and 15192 are separated by 302 nucleotides mRNA_6820: 15188 - K00931 proB glutamate 5-kinase, at 207,707 to 209,492 15188 mRNA_6821: 15189 - K07739 ELP3, KAT9 elongator complex protein 3, at 209,677 to 212,045 15189 mRNA_6822: 15190 - K20303 TRAPPC4, TRS23 trafficking protein particle complex subunit 4, at 212,371 to 212,952 15190 mRNA_6823: 15191 - BLAST TNFR/NGFR cysteine-rich region family protein [Rh..., at 212,993 to 213,573 15191 mRNA_6824: 15192 - K03061 PSMC2, RPT1 26S proteasome regulatory subunit T1, at 213,876 to 215,865 15192
Group Condition mRNA_6820 mRNA_6821 mRNA_6822 mRNA_6823 mRNA_6824
15188 15189 15190 15191 15192
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.8 N.D. -2.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.6 N.D. -2.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -1.6 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.9 N.D. -0.5 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.6 N.D. -1.3 N.D.
growth on ypd YPD N.D. -0.2 N.D. -0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -1.0 N.D. +0.4 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 N.D. -0.5 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.2 N.D. -0.3 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 N.D. -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.8 N.D. +0.9 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 N.D. +0.1 N.D.
auxotrophy YNB Glucose N.D. -0.0 N.D. +0.3 N.D.
growth on oleic acid YNB Glucose N.D. +0.1 N.D. +0.2 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.1 N.D. +0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.4 N.D. +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 N.D. +0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.8 N.D. -0.2 N.D.
auxotrophy Dropout Complete N.D. -0.1 N.D. +0.8 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.0 N.D. +0.8 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.3 N.D. +0.8 N.D.
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