Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 15189 and 15190 are separated by 325 nucleotides15190 and 15191 are separated by 40 nucleotides15191 and 15192 are separated by 302 nucleotides15192 and 15193 are separated by 212 nucleotides mRNA_6821: 15189 - K07739 ELP3, KAT9 elongator complex protein 3, at 209,677 to 212,045 15189 mRNA_6822: 15190 - K20303 TRAPPC4, TRS23 trafficking protein particle complex subunit 4, at 212,371 to 212,952 15190 mRNA_6823: 15191 - BLAST TNFR/NGFR cysteine-rich region family protein [Rh..., at 212,993 to 213,573 15191 mRNA_6824: 15192 - K03061 PSMC2, RPT1 26S proteasome regulatory subunit T1, at 213,876 to 215,865 15192 mRNA_6825: 15193 - K08876 SCYL1 SCY1-like protein 1, at 216,078 to 219,615 15193
Group Condition mRNA_6821 mRNA_6822 mRNA_6823 mRNA_6824 mRNA_6825
15189 15190 15191 15192 15193
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 N.D. -2.2 N.D. +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 N.D. -2.2 N.D. +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 N.D. -1.3 N.D. -0.6
ypd buoyancy 40 hrs Low Buoyancy -1.6 N.D. -0.1 N.D. +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 N.D. -0.5 N.D. +0.3
growth on ypd YPD -0.2 N.D. -0.5 N.D. +0.3
growth on ricinoleic acid YNB Glucose -0.2 N.D. -0.3 N.D. +0.2
facs on lipid accumulation Sorted No BODIPY Gate -1.0 N.D. +0.4 N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 N.D. -0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. -0.5 N.D. +0.5
ypd buoyancy 40 hrs High Buoyancy +0.8 N.D. -0.2 N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.8 N.D. +0.9 N.D. +0.2
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.3 N.D. +0.2
growth on oleic acid YNB Glucose +0.1 N.D. +0.2 N.D. +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 N.D. +0.1 N.D. +0.5
auxotrophy YNB Glucose -0.0 N.D. +0.3 N.D. +0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 N.D. +0.4 N.D. +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. +0.1 N.D. +0.5
auxotrophy YNB Glucose 75mM Methionine -0.0 N.D. +0.8 N.D. +0.3
auxotrophy YNB Glucose 75mM Arginine +0.3 N.D. +0.8 N.D. +0.4
auxotrophy Dropout Complete -0.1 N.D. +0.8 N.D. +0.8
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