Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15190 and 15191 are separated by 40 nucleotides15191 and 15192 are separated by 302 nucleotides15192 and 15193 are separated by 212 nucleotides15193 and 15194 are separated by 111 nucleotides mRNA_6822: 15190 - K20303 TRAPPC4, TRS23 trafficking protein particle complex subunit 4, at 212,371 to 212,952 15190 mRNA_6823: 15191 - BLAST TNFR/NGFR cysteine-rich region family protein [Rh..., at 212,993 to 213,573 15191 mRNA_6824: 15192 - K03061 PSMC2, RPT1 26S proteasome regulatory subunit T1, at 213,876 to 215,865 15192 mRNA_6825: 15193 - K08876 SCYL1 SCY1-like protein 1, at 216,078 to 219,615 15193 mRNA_6826: 15194 - KOG2061 Uncharacterized MYND Zn-finger protein, at 219,727 to 220,528 15194
Group Condition mRNA_6822 mRNA_6823 mRNA_6824 mRNA_6825 mRNA_6826
15190 15191 15192 15193 15194
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.3 N.D. -0.6 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -2.2 N.D. +0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -2.2 N.D. +0.4 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 N.D. -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.5 N.D. +0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 N.D. -0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.5 N.D. +0.5 -0.3
growth on ricinoleic acid YNB Glucose N.D. -0.3 N.D. +0.2 +0.3
growth on oleic acid YNB Glucose N.D. +0.2 N.D. +0.2 -0.3
growth on ypd YPD N.D. -0.5 N.D. +0.3 +0.4
growth on oleic acid YNB Oleic Acid N.D. +0.3 N.D. +0.2 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 N.D. +0.5 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 N.D. +0.5 +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.4 N.D. +0.4 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.1 N.D. +0.5 +0.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.8 N.D. +0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.4 N.D. +0.4 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.8 N.D. +0.4 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.9 N.D. +0.2 +0.1
auxotrophy YNB Glucose N.D. +0.3 N.D. +0.6 +0.4
auxotrophy Dropout Complete N.D. +0.8 N.D. +0.8 +0.1
remove
mRNA_6822
plot
remove
mRNA_6823
plot
remove
mRNA_6824
remove
mRNA_6825
plot
remove
mRNA_6826
plot