Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15191 and 15192 are separated by 302 nucleotides
15192 and 15193 are separated by 212 nucleotides
15193 and 15194 are separated by 111 nucleotides
15194 and 15195 are separated by 266 nucleotides
mRNA_6823: 15191 - BLAST TNFR/NGFR cysteine-rich region family protein [Rh..., at 212,993 to 213,573
15191
mRNA_6824: 15192 - K03061 PSMC2, RPT1 26S proteasome regulatory subunit T1, at 213,876 to 215,865
15192
mRNA_6825: 15193 - K08876 SCYL1 SCY1-like protein 1, at 216,078 to 219,615
15193
mRNA_6826: 15194 - KOG2061 Uncharacterized MYND Zn-finger protein, at 219,727 to 220,528
15194
mRNA_6827: 15195 - K19029 PFKFB2 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 2, at 220,795 to 223,587
15195
Group
Condition
mRNA
_6823
mRNA
_6824
mRNA
_6825
mRNA
_6826
mRNA
_6827
15191
15192
15193
15194
15195
ypd buoyancy
40 hrs No Buoyancy Separation
-1.3
N.D.
-0.6
-0.6
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-2.2
N.D.
+0.3
-0.2
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-2.2
N.D.
+0.4
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
N.D.
+0.3
-0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
-0.0
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
N.D.
-0.4
+0.2
+0.2
growth on ricinoleic acid
YNB Glucose
-0.3
N.D.
+0.2
+0.3
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
N.D.
+0.5
-0.3
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
N.D.
+0.4
+0.1
-0.9
growth on ypd
YPD
-0.5
N.D.
+0.3
+0.4
-0.2
growth on oleic acid
YNB Glucose
+0.2
N.D.
+0.2
-0.3
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
N.D.
+0.5
+0.1
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
+0.9
N.D.
+0.2
+0.1
-1.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
+0.5
+0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
N.D.
+0.4
+0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.8
N.D.
+0.3
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.8
N.D.
+0.4
-0.1
-0.1
auxotrophy
YNB Glucose
+0.3
N.D.
+0.6
+0.4
+0.0
growth on oleic acid
YNB Oleic Acid
+0.3
N.D.
+0.2
+0.1
+0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
N.D.
+0.5
+0.3
+0.5
auxotrophy
Dropout Complete
+0.8
N.D.
+0.8
+0.1
+0.0
remove
mRNA_6823
plot
remove
mRNA_6824
plot
remove
mRNA_6825
remove
mRNA_6826
plot
remove
mRNA_6827
plot