Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15192 and 15193 are separated by 212 nucleotides15193 and 15194 are separated by 111 nucleotides15194 and 15195 are separated by 266 nucleotides15195 and 15196 are separated by 265 nucleotides mRNA_6824: 15192 - K03061 PSMC2, RPT1 26S proteasome regulatory subunit T1, at 213,876 to 215,865 15192 mRNA_6825: 15193 - K08876 SCYL1 SCY1-like protein 1, at 216,078 to 219,615 15193 mRNA_6826: 15194 - KOG2061 Uncharacterized MYND Zn-finger protein, at 219,727 to 220,528 15194 mRNA_6827: 15195 - K19029 PFKFB2 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 2, at 220,795 to 223,587 15195 mRNA_6828: 15196 - K17338 REEP1_2_3_4 receptor expression-enhancing protein 1/2/3/4, at 223,853 to 225,358 15196
Group Condition mRNA_6824 mRNA_6825 mRNA_6826 mRNA_6827 mRNA_6828
15192 15193 15194 15195 15196
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.6 -0.6 -0.4 -1.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.4 +0.3 -0.3 -1.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.4 +0.1 -0.9 -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 +0.1 -1.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.0 -0.1 -0.1 -0.1
growth on oleic acid YNB Glucose N.D. +0.2 -0.3 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.3 -0.2 -0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. -0.4 +0.2 +0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.5 +0.2 -0.3 -0.3
growth on ypd YPD N.D. +0.3 +0.4 -0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine N.D. +0.4 -0.1 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 -0.1 -0.3 +0.4
growth on ricinoleic acid YNB Glucose N.D. +0.2 +0.3 -0.5 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.5 +0.1 -0.6 +0.3
auxotrophy Dropout Complete N.D. +0.8 +0.1 +0.0 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.5 -0.3 +0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.3 -0.2 +0.1 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 +0.0 +0.0 +0.3
growth on oleic acid YNB Oleic Acid N.D. +0.2 +0.1 +0.7 -0.1
auxotrophy YNB Glucose N.D. +0.6 +0.4 +0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.5 +0.3 +0.5 +0.6
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