Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15195 and 15196 are separated by 265 nucleotides15196 and 15197 are separated by 516 nucleotides15197 and 15198 are separated by 149 nucleotides15198 and 15199 are separated by 308 nucleotides mRNA_6827: 15195 - K19029 PFKFB2 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 2, at 220,795 to 223,587 15195 mRNA_6828: 15196 - K17338 REEP1_2_3_4 receptor expression-enhancing protein 1/2/3/4, at 223,853 to 225,358 15196 mRNA_6829: 15197 - HMMPfam-TAP42-like family-PF04177, at 225,875 to 227,277 15197 mRNA_6830: 15198 - K07893 RAB6A Ras-related protein Rab-6A, at 227,427 to 228,724 15198 mRNA_6831: 15199 - HMMPfam-ATP synthase regulation protein NCA2-PF08637, at 229,033 to 229,533 15199
Group Condition mRNA_6827 mRNA_6828 mRNA_6829 mRNA_6830 mRNA_6831
15195 15196 15197 15198 15199
facs on lipid accumulation Sorted High BODIPY Gate -1.0 +0.0 N.D. -2.8 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -1.2 N.D. -1.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.2 N.D. -1.9 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -1.1 N.D. -1.1 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 +0.3 N.D. -1.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 N.D. -1.8 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.3 N.D. -1.1 -0.0
growth on oleic acid YNB Glucose -0.1 -0.2 N.D. -0.7 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 N.D. -0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.3 N.D. +0.5 -0.4
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 N.D. -0.1 -0.3
growth on ricinoleic acid YNB Glucose -0.5 +0.3 N.D. -0.1 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.5 +0.6 N.D. -0.8 -0.5
growth on ypd YPD -0.2 -0.4 N.D. -0.2 +0.6
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 N.D. -0.3 +0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.5 N.D. -0.7 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.0 N.D. -0.4 +0.6
auxotrophy Dropout Complete +0.0 -0.5 N.D. +0.2 +0.3
growth on oleic acid YNB Oleic Acid +0.7 -0.1 N.D. -0.3 +0.0
auxotrophy YNB Glucose +0.0 +0.1 N.D. -0.4 +0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.4 N.D. +0.2 +0.5
remove
mRNA_6827
plot
remove
mRNA_6828
plot
remove
mRNA_6829
remove
mRNA_6830
plot
remove
mRNA_6831
plot