Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15197 and 15198 are separated by 149 nucleotides15198 and 15199 are separated by 308 nucleotides15199 and 15200 are separated by 178 nucleotides15200 and 15201 are separated by 146 nucleotides mRNA_6829: 15197 - HMMPfam-TAP42-like family-PF04177, at 225,875 to 227,277 15197 mRNA_6830: 15198 - K07893 RAB6A Ras-related protein Rab-6A, at 227,427 to 228,724 15198 mRNA_6831: 15199 - HMMPfam-ATP synthase regulation protein NCA2-PF08637, at 229,033 to 229,533 15199 mRNA_6832: 15200 - K18158 NCA2 nuclear control of ATPase protein 2, at 229,712 to 231,545 15200 mRNA_6833: 15201 - HMMPfam-Outer mitochondrial membrane transport complex protein-PF10568,HMMPfam-Tom37 C-terminal domain-PF11801, at 231,692 to 232,700 15201
Group Condition mRNA_6829 mRNA_6830 mRNA_6831 mRNA_6832 mRNA_6833
15197 15198 15199 15200 15201
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -1.5 -0.1 -0.3 -1.6
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.8 -0.5 -0.5 -1.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. -2.8 +0.4 +0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -1.9 +0.4 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -1.8 +0.3 +0.1 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.1 -0.3 +0.6 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -1.1 -0.0 +0.1 +0.0
growth on oleic acid YNB Glucose N.D. -0.7 +0.1 -0.0 -0.4
growth on ricinoleic acid YNB Glucose N.D. -0.1 +0.1 -0.1 -0.9
growth on oleic acid YNB Oleic Acid N.D. -0.3 +0.0 +0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -1.1 +0.3 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.7 -0.0 +0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. -0.4 +0.6 +0.1 -0.6
auxotrophy YNB Glucose N.D. -0.4 +0.8 -0.1 -0.6
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 +0.6 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.3 -0.1 +0.3 +0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.5 -0.4 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.3 +0.4 +0.1
auxotrophy Dropout Complete N.D. +0.2 +0.3 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 +0.5 +0.7 -0.7
growth on ypd YPD N.D. -0.2 +0.6 +0.3 +0.6
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