Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 15201 and 15202 are separated by 964 nucleotides15202 and 15203 are separated by 468 nucleotides15203 and 15204 are separated by 1029 nucleotides15204 and 15205 are separated by 496 nucleotides mRNA_6833: 15201 - HMMPfam-Outer mitochondrial membrane transport complex protein-PF10568,HMMPfam-Tom37 C-terminal domain-PF11801, at 231,692 to 232,700 15201 mRNA_6834: 15202 - KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family, at 233,665 to 235,762 15202 mRNA_6835: 15203 - Hypothetical Protein, at 236,231 to 236,767 15203 mRNA_6836: 15204 - Interpro Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family, at 237,797 to 238,899 15204 mRNA_6837: 15205 - HMMPfam-DUF2407 ubiquitin-like domain-PF10302,HMMPfam-DUF2407 C-terminal domain-PF13373, at 239,396 to 240,785 15205
Group Condition mRNA_6833 mRNA_6834 mRNA_6835 mRNA_6836 mRNA_6837
15201 15202 15203 15204 15205
growth on ricinoleic acid YNB Methylricinoleic Acid -1.6 -0.0 -0.0 +0.0 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -1.2 -0.1 -0.2 -0.3 +0.1
growth on ricinoleic acid YNB Glucose -0.9 -0.2 +0.0 -0.1 -0.1
growth on oleic acid YNB Glucose -0.4 -0.0 -0.0 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.0 -0.1 -0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 -0.4 -0.4 -0.0
growth on oleic acid YNB Oleic Acid -0.5 +0.0 -0.0 -0.1 -0.2
auxotrophy YNB Glucose -0.6 -0.2 +0.0 +0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.6 +0.1 -0.2 +0.2 -0.1
auxotrophy Dropout Complete -0.2 +0.0 -0.3 +0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.2 +0.3 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 +0.1 +0.0 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.1 -0.4 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 +0.1 +0.3 +0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +0.0 -0.2 +1.0 -0.8
growth on ypd YPD +0.6 -0.3 +0.6 -0.8 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 +0.9 -0.8 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.1 +0.7 +0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 +0.4 +0.5 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 +0.5 +0.5 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.0 +0.6 +0.6 -0.1
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