Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15203 and 15204 are separated by 1029 nucleotides15204 and 15205 are separated by 496 nucleotides15205 and 15206 are separated by 155 nucleotides15206 and 15207 are separated by 207 nucleotides mRNA_6835: 15203 - Hypothetical Protein, at 236,231 to 236,767 15203 mRNA_6836: 15204 - Interpro Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family, at 237,797 to 238,899 15204 mRNA_6837: 15205 - HMMPfam-DUF2407 ubiquitin-like domain-PF10302,HMMPfam-DUF2407 C-terminal domain-PF13373, at 239,396 to 240,785 15205 mRNA_6838: 15206 - K17656 MSS51 mitochondrial splicing suppressor protein 51, at 240,941 to 242,492 15206 mRNA_6839: 15207 - K17257 ITFG1 integrin alpha FG-GAP repeat containing protein 1, at 242,700 to 245,129 15207
Group Condition mRNA_6835 mRNA_6836 mRNA_6837 mRNA_6838 mRNA_6839
15203 15204 15205 15206 15207
growth on ypd YPD +0.6 -0.8 -0.2 N.D. -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 +1.0 -0.8 N.D. -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3 -0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 -0.4 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 +0.3 -0.3 N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.1 -0.2 N.D. +0.1
growth on oleic acid YNB Glucose -0.0 -0.3 -0.3 N.D. +0.7
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.4 -0.0 N.D. +0.9
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 +0.2 -0.3 N.D. -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.3 +0.1 N.D. +0.7
facs on lipid accumulation Sorted High BODIPY Gate +0.9 -0.8 +0.3 N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.5 -0.1 N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.0 -0.1 -0.2 N.D. +1.0
growth on ricinoleic acid YNB Glucose +0.0 -0.1 -0.1 N.D. +1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.2 -0.2 N.D. +0.6
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.2 -0.1 N.D. +1.0
auxotrophy Dropout Complete -0.3 +0.3 -0.3 N.D. +1.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 +0.0 -0.4 N.D. +1.5
ypd buoyancy 40 hrs High Buoyancy +0.6 +0.6 -0.1 N.D. +0.1
auxotrophy YNB Glucose +0.0 +0.0 -0.1 N.D. +1.3
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.5 -0.0 N.D. +0.5
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