Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15207 and 15208 are separated by 108 nucleotides15208 and 15209 are separated by 116 nucleotides15209 and 15210 are separated by 45 nucleotides15210 and 15211 are separated by 122 nucleotides mRNA_6839: 15207 - K17257 ITFG1 integrin alpha FG-GAP repeat containing protein 1, at 242,700 to 245,129 15207 mRNA_6840: 15208 - SUPERFAMILY--SSF81383, at 245,238 to 247,225 15208 mRNA_6841: 15209 - K14328 UPF3, RENT3 regulator of nonsense transcripts 3, at 247,342 to 248,930 15209 mRNA_6842: 15210 - K02605 ORC3 origin recognition complex subunit 3, at 248,976 to 251,916 15210 mRNA_6843: 15211 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 252,039 to 252,813 15211
Group Condition mRNA_6839 mRNA_6840 mRNA_6841 mRNA_6842 mRNA_6843
15207 15208 15209 15210 15211
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 +0.1 N.D. N.D. -2.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 N.D. N.D. -1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.0 N.D. N.D. -0.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.2 N.D. N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +1.5 -0.2 N.D. N.D. -1.7
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.0 N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 N.D. N.D. -0.6
growth on ypd YPD -0.3 -0.0 N.D. N.D. +0.4
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 N.D. N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.0 N.D. N.D. -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 N.D. N.D. +0.2
growth on ricinoleic acid YNB Glucose +1.0 -0.0 N.D. N.D. -0.6
ypd buoyancy 40 hrs Low Buoyancy +0.5 +0.2 N.D. N.D. -0.3
growth on oleic acid YNB Oleic Acid +1.0 +0.2 N.D. N.D. -0.7
growth on oleic acid YNB Glucose +0.7 +0.1 N.D. N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.1 N.D. N.D. +0.9
auxotrophy YNB Glucose 75mM Methionine +0.9 -0.1 N.D. N.D. -0.1
auxotrophy YNB Glucose +1.3 -0.2 N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Arginine +1.0 +0.1 N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.1 N.D. N.D. +0.5
auxotrophy Dropout Complete +1.3 -0.1 N.D. N.D. +0.1
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