Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15209 and 15210 are separated by 45 nucleotides15210 and 15211 are separated by 122 nucleotides15211 and 15212 are separated by 282 nucleotides15212 and 15213 are separated by 103 nucleotides mRNA_6841: 15209 - K14328 UPF3, RENT3 regulator of nonsense transcripts 3, at 247,342 to 248,930 15209 mRNA_6842: 15210 - K02605 ORC3 origin recognition complex subunit 3, at 248,976 to 251,916 15210 mRNA_6843: 15211 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 252,039 to 252,813 15211 mRNA_6844: 15212 - K12183 TSG101, STP22, VPS23 ESCRT-I complex subunit TSG101, at 253,096 to 258,115 15212 mRNA_6845: 15213 - Hypothetical Protein, at 258,219 to 259,363 15213
Group Condition mRNA_6841 mRNA_6842 mRNA_6843 mRNA_6844 mRNA_6845
15209 15210 15211 15212 15213
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -2.9 -0.6 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -1.7 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -1.2 -0.2 +0.0
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.6 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.8 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.6 -0.1 -0.3
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.7 -0.0 -0.1
growth on oleic acid YNB Glucose N.D. N.D. -0.3 +0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -0.6 +0.0 +0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.0 -0.0 -0.1
growth on ypd YPD N.D. N.D. +0.4 -0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.1 +0.2 +0.0
auxotrophy YNB Glucose N.D. N.D. -0.3 +0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.2 +0.6 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.3 +0.3 +0.3
auxotrophy Dropout Complete N.D. N.D. +0.1 +0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.1 +0.4 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.9 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.5 +0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.2 +0.2 +0.3
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.0 +0.5 +0.2
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