Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15229 and 15230 are separated by 59 nucleotides15230 and 15231 are separated by 413 nucleotides15231 and 15232 are separated by 162 nucleotides15232 and 15233 are separated by 91 nucleotides mRNA_6861: 15229 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 301,646 to 303,773 15229 mRNA_6862: 15230 - KOG0754 Mitochondrial oxodicarboxylate carrier protein, at 303,833 to 305,130 15230 mRNA_6863: 15231 - HMMPfam-Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like-PF05365,SUPERFAMILY--SSF81514, at 305,544 to 305,791 15231 mRNA_6864: 15232 - K18416 THEX1, ERI1 3'-5' exoribonuclease 1, at 305,954 to 308,144 15232 mRNA_6865: 15233 - HMMPfam-Spc24 subunit of Ndc80-PF08286,SUPERFAMILY--SSF143026, at 308,236 to 309,069 15233
Group Condition mRNA_6861 mRNA_6862 mRNA_6863 mRNA_6864 mRNA_6865
15229 15230 15231 15232 15233
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -1.1 N.D. -0.4 N.D.
growth on oleic acid YNB Oleic Acid -0.6 -0.3 N.D. -0.3 N.D.
growth on ypd YPD -0.8 -0.7 N.D. +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.6 N.D. -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.5 N.D. -0.5 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -1.2 N.D. +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.5 N.D. -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.0 N.D. -0.4 N.D.
growth on oleic acid YNB Glucose -0.1 -0.1 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 N.D. +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.3 N.D. -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.2 N.D. -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.4 N.D. -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.3 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Glucose +0.0 -0.0 N.D. -0.2 N.D.
auxotrophy Dropout Complete +0.1 -0.2 N.D. -0.1 N.D.
auxotrophy YNB Glucose +0.1 -0.2 N.D. -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 +0.0 N.D. -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 N.D. +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.3 N.D. +0.4 N.D.
remove
mRNA_6861
plot		 remove
mRNA_6862
plot		 remove
mRNA_6863		 remove
mRNA_6864
plot		 remove
mRNA_6865
plot