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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15232 and 15233 are separated by 91 nucleotides
15233 and 15234 are separated by 296 nucleotides
15234 and 15235 are separated by 130 nucleotides
15235 and 15236 are separated by 44 nucleotides
mRNA_6864: 15232 - K18416 THEX1, ERI1 3'-5' exoribonuclease 1, at 305,954 to 308,144
15232
mRNA_6865: 15233 - HMMPfam-Spc24 subunit of Ndc80-PF08286,SUPERFAMILY--SSF143026, at 308,236 to 309,069
15233
mRNA_6866: 15234 - Hypothetical Protein, at 309,366 to 310,327
15234
mRNA_6867: 15235 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 310,458 to 312,954
15235
mRNA_6868: 15236 - Hypothetical Protein, at 312,999 to 313,640
15236
Group
Condition
mRNA
_6864
mRNA
_6865
mRNA
_6866
mRNA
_6867
mRNA
_6868
15232
15233
15234
15235
15236
ypd buoyancy
40 hrs No Buoyancy Separation
+0.4
N.D.
-0.3
-1.2
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
N.D.
+0.3
+0.2
-0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
N.D.
+0.3
+0.2
-0.6
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
+0.1
-0.2
-0.2
growth on ricinoleic acid
YNB Glucose
-0.2
N.D.
+0.1
+0.1
-0.5
auxotrophy
YNB Glucose 75mM Methionine
-0.4
N.D.
+0.4
-0.2
-0.2
growth on oleic acid
YNB Glucose
-0.1
N.D.
+0.0
+0.2
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
+0.5
+0.1
-0.6
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
+0.2
+0.1
-0.2
auxotrophy
YNB Glucose
-0.1
N.D.
+0.7
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
N.D.
+0.2
+0.2
+0.1
auxotrophy
Dropout Complete
-0.1
N.D.
+0.4
+0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
+0.2
-0.2
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
-0.0
+0.1
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
N.D.
+0.0
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
N.D.
+0.2
+0.2
+0.2
growth on ypd
YPD
+0.3
N.D.
+0.1
+0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.0
N.D.
+0.2
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
N.D.
+0.1
+0.4
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
N.D.
+0.3
+0.9
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
N.D.
+0.4
+0.5
+0.5
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