Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15232 and 15233 are separated by 91 nucleotides15233 and 15234 are separated by 296 nucleotides15234 and 15235 are separated by 130 nucleotides15235 and 15236 are separated by 44 nucleotides mRNA_6864: 15232 - K18416 THEX1, ERI1 3'-5' exoribonuclease 1, at 305,954 to 308,144 15232 mRNA_6865: 15233 - HMMPfam-Spc24 subunit of Ndc80-PF08286,SUPERFAMILY--SSF143026, at 308,236 to 309,069 15233 mRNA_6866: 15234 - Hypothetical Protein, at 309,366 to 310,327 15234 mRNA_6867: 15235 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 310,458 to 312,954 15235 mRNA_6868: 15236 - Hypothetical Protein, at 312,999 to 313,640 15236
Group Condition mRNA_6864 mRNA_6865 mRNA_6866 mRNA_6867 mRNA_6868
15232 15233 15234 15235 15236
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 N.D. -0.3 -1.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 N.D. +0.3 +0.2 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 N.D. +0.3 +0.2 -0.6
growth on oleic acid YNB Oleic Acid -0.3 N.D. +0.1 -0.2 -0.2
growth on ricinoleic acid YNB Glucose -0.2 N.D. +0.1 +0.1 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.4 N.D. +0.4 -0.2 -0.2
growth on oleic acid YNB Glucose -0.1 N.D. +0.0 +0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. +0.5 +0.1 -0.6
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. +0.2 +0.1 -0.2
auxotrophy YNB Glucose -0.1 N.D. +0.7 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 N.D. +0.2 +0.2 +0.1
auxotrophy Dropout Complete -0.1 N.D. +0.4 +0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 N.D. +0.2 -0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. -0.0 +0.1 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. +0.0 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 N.D. +0.2 +0.2 +0.2
growth on ypd YPD +0.3 N.D. +0.1 +0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. +0.2 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 N.D. +0.1 +0.4 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 N.D. +0.3 +0.9 +0.4
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. +0.4 +0.5 +0.5
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