Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15233 and 15234 are separated by 296 nucleotides15234 and 15235 are separated by 130 nucleotides15235 and 15236 are separated by 44 nucleotides15236 and 15237 are separated by 682 nucleotides mRNA_6865: 15233 - HMMPfam-Spc24 subunit of Ndc80-PF08286,SUPERFAMILY--SSF143026, at 308,236 to 309,069 15233 mRNA_6866: 15234 - Hypothetical Protein, at 309,366 to 310,327 15234 mRNA_6867: 15235 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 310,458 to 312,954 15235 mRNA_6868: 15236 - Hypothetical Protein, at 312,999 to 313,640 15236 mRNA_6869: 15237 - K06125 COQ2 4-hydroxybenzoate polyprenyltransferase, at 314,323 to 315,416 15237
Group Condition mRNA_6865 mRNA_6866 mRNA_6867 mRNA_6868 mRNA_6869
15233 15234 15235 15236 15237
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.3 -1.2 -0.2 N.D.
growth on ricinoleic acid YNB Glucose N.D. +0.1 +0.1 -0.5 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.2 -0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.3 +0.2 -0.8 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.3 +0.2 -0.6 N.D.
growth on oleic acid YNB Glucose N.D. +0.0 +0.2 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.4 -0.2 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 +0.1 -0.2 N.D.
growth on ypd YPD N.D. +0.1 +0.2 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.5 +0.1 -0.6 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 -0.2 +0.2 N.D.
auxotrophy YNB Glucose N.D. +0.7 -0.2 -0.2 N.D.
auxotrophy Dropout Complete N.D. +0.4 +0.1 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.0 +0.1 +0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 +0.1 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.2 +0.2 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 +0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.2 +0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.4 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 +0.5 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.3 +0.9 +0.4 N.D.
remove
mRNA_6865
plot		 remove
mRNA_6866
plot		 remove
mRNA_6867		 remove
mRNA_6868
plot		 remove
mRNA_6869
plot