Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15234 and 15235 are separated by 130 nucleotides15235 and 15236 are separated by 44 nucleotides15236 and 15237 are separated by 682 nucleotides15237 and 15238 are separated by 47 nucleotides mRNA_6866: 15234 - Hypothetical Protein, at 309,366 to 310,327 15234 mRNA_6867: 15235 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 310,458 to 312,954 15235 mRNA_6868: 15236 - Hypothetical Protein, at 312,999 to 313,640 15236 mRNA_6869: 15237 - K06125 COQ2 4-hydroxybenzoate polyprenyltransferase, at 314,323 to 315,416 15237 mRNA_6870: 15238 - K08736 MSH3 DNA mismatch repair protein MSH3, at 315,464 to 319,765 15238
Group Condition mRNA_6866 mRNA_6867 mRNA_6868 mRNA_6869 mRNA_6870
15234 15235 15236 15237 15238
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -1.2 -0.2 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 +0.2 -0.8 N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.1 -0.5 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.2 -0.6 N.D. -0.0
growth on oleic acid YNB Oleic Acid +0.1 -0.2 -0.2 N.D. +0.2
growth on oleic acid YNB Glucose +0.0 +0.2 -0.2 N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.1 -0.2 N.D. +0.0
auxotrophy YNB Glucose 75mM Methionine +0.4 -0.2 -0.2 N.D. +0.1
growth on ypd YPD +0.1 +0.2 -0.2 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.2 +0.2 N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 +0.1 +0.4 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine +0.5 +0.1 -0.6 N.D. +0.2
auxotrophy YNB Glucose +0.7 -0.2 -0.2 N.D. +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.1 +0.3 N.D. +0.1
auxotrophy Dropout Complete +0.4 +0.1 -0.1 N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.2 +0.2 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 +0.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.2 +0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.4 +0.2 N.D. +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.5 +0.5 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.9 +0.4 N.D. +0.3
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