Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15236 and 15237 are separated by 682 nucleotides15237 and 15238 are separated by 47 nucleotides15238 and 15239 are separated by 179 nucleotides15239 and 15240 are separated by 175 nucleotides mRNA_6868: 15236 - Hypothetical Protein, at 312,999 to 313,640 15236 mRNA_6869: 15237 - K06125 COQ2 4-hydroxybenzoate polyprenyltransferase, at 314,323 to 315,416 15237 mRNA_6870: 15238 - K08736 MSH3 DNA mismatch repair protein MSH3, at 315,464 to 319,765 15238 mRNA_6871: 15239 - K17600 VPS54 vacuolar protein sorting-associated protein 54, at 319,945 to 325,501 15239 mRNA_6872: 15240 - KOG3035 Isoamyl acetate-hydrolyzing esterase, at 325,677 to 326,693 15240
Group Condition mRNA_6868 mRNA_6869 mRNA_6870 mRNA_6871 mRNA_6872
15236 15237 15238 15239 15240
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 N.D. -0.1 -0.5 -1.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 N.D. -0.1 -0.2 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 N.D. +0.0 -0.4 -0.5
growth on ricinoleic acid YNB Glucose -0.5 N.D. +0.0 +0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 N.D. +0.1 -0.1 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 N.D. -0.2 -1.0 +0.4
auxotrophy YNB Glucose 75mM Arginine -0.6 N.D. +0.2 +0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. +0.1 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. +0.1 +0.0 -0.3
growth on ypd YPD -0.2 N.D. +0.1 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. +0.2 -0.2 -0.0
growth on oleic acid YNB Oleic Acid -0.2 N.D. +0.2 +0.6 -0.2
auxotrophy Dropout Complete -0.1 N.D. +0.2 +0.5 -0.2
auxotrophy YNB Glucose -0.2 N.D. +0.3 +0.3 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 N.D. -0.0 +0.5 +0.8
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. +0.1 +0.1 +0.2
growth on oleic acid YNB Glucose -0.2 N.D. +0.0 +0.2 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 N.D. +0.1 +0.1 +0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.5 N.D. +0.3 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. +0.1 +0.0 +1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 N.D. +0.3 +0.4 +1.4
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