Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15240 and 15241 are separated by 230 nucleotides15241 and 15242 are separated by 80 nucleotides15242 and 15243 are separated by 271 nucleotides15243 and 15244 are separated by 478 nucleotides mRNA_6872: 15240 - KOG3035 Isoamyl acetate-hydrolyzing esterase, at 325,677 to 326,693 15240 mRNA_6873: 15241 - K01409 KAE1, tsaD, QRI7 N6-L-threonylcarbamoyladenine synthase, at 326,924 to 328,423 15241 mRNA_6874: 15242 - BLAST similar to An13g00570 [Aspergillus niger], at 328,504 to 329,604 15242 mRNA_6875: 15243 - K10563 mutM, fpg formamidopyrimidine-DNA glycosylase, at 329,876 to 331,485 15243 mRNA_6876: 15244 - Hypothetical Protein, at 331,964 to 333,369 15244
Group Condition mRNA_6872 mRNA_6873 mRNA_6874 mRNA_6875 mRNA_6876
15240 15241 15242 15243 15244
ypd buoyancy 40 hrs No Buoyancy Separation -1.7 -0.2 -0.2 -0.0 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 -0.1 +0.4 -0.1 -1.6
facs on lipid accumulation Sorted High BODIPY Gate +0.3 -0.3 -0.2 -0.1 -1.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 +0.1 -0.2 +0.0 -1.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 +0.0 +0.2 -0.5 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 +0.1 -0.1 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +0.1 +0.1 +0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.5 +0.2 +0.2 -0.2 +0.4
growth on ypd YPD +0.1 +1.0 -0.3 -0.6 +0.3
growth on oleic acid YNB Oleic Acid -0.2 +0.3 +0.2 +0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 +0.0 +0.0 +0.3 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.4 +0.4 -0.7 +0.5 -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.0 -0.0 +0.1 +0.3 -0.5
growth on ricinoleic acid YNB Glucose -0.3 +0.0 +0.3 +0.4 +0.6
auxotrophy Dropout Complete -0.2 +0.4 +0.1 -0.1 +1.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.2 +0.3 -0.4 +0.8
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.4 +0.4 +0.0 +0.5
growth on oleic acid YNB Glucose +0.7 +0.1 +0.4 +0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 +0.2 +0.1 +0.1 +0.5
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.5 +0.4 -0.0 +1.0
auxotrophy YNB Glucose +0.2 +0.4 +0.4 +0.1 +1.1
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