Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15243 and 15244 are separated by 478 nucleotides
15244 and 15245 are separated by 570 nucleotides
15245 and 15246 are separated by 378 nucleotides
15246 and 15247 are separated by 1384 nucleotides
mRNA_6875: 15243 - K10563 mutM, fpg formamidopyrimidine-DNA glycosylase, at 329,876 to 331,485
15243
mRNA_6876: 15244 - Hypothetical Protein, at 331,964 to 333,369
15244
mRNA_6877: 15245 - KOG3912 Predicted integral membrane protein, at 333,940 to 335,664
15245
mRNA_6878: 15246 - Hypothetical Protein, at 336,043 to 337,941
15246
mRNA_6879: 15247 - KOG0293 WD40 repeat-containing protein, at 339,326 to 341,674
15247
Group
Condition
mRNA
_6875
mRNA
_6876
mRNA
_6877
mRNA
_6878
mRNA
_6879
15243
15244
15245
15246
15247
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-1.8
+0.2
-0.7
-1.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-1.6
-0.0
+0.3
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.6
+0.3
-0.6
-0.9
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.5
+0.3
-0.8
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.0
-1.1
-0.1
+0.1
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.5
+0.0
+0.0
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.5
+0.1
+0.1
-0.3
growth on ypd
YPD
-0.6
+0.3
-0.1
+0.2
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.3
-0.3
-0.1
+0.4
growth on oleic acid
YNB Glucose
+0.1
+0.2
-0.3
-0.0
-0.1
growth on oleic acid
YNB Oleic Acid
+0.2
-0.0
-0.2
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
-0.9
+0.1
+0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.4
+0.4
-0.0
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-0.2
+0.7
-0.5
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.4
+0.8
+0.2
-0.0
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.5
+0.1
-0.2
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.5
-0.1
-0.1
+0.2
auxotrophy
Dropout Complete
-0.1
+1.0
+0.0
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
+0.4
+0.6
+0.1
+0.0
-0.1
auxotrophy
YNB Glucose
+0.1
+1.1
+0.2
+0.4
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+1.0
+0.1
+0.2
+0.2
remove
mRNA_6875
plot
remove
mRNA_6876
plot
remove
mRNA_6877
remove
mRNA_6878
plot
remove
mRNA_6879
plot