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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15245 and 15246 are separated by 378 nucleotides
15246 and 15247 are separated by 1384 nucleotides
15247 and 15248 are separated by 918 nucleotides
15248 and 15249 are separated by 431 nucleotides
mRNA_6877: 15245 - KOG3912 Predicted integral membrane protein, at 333,940 to 335,664
15245
mRNA_6878: 15246 - Hypothetical Protein, at 336,043 to 337,941
15246
mRNA_6879: 15247 - KOG0293 WD40 repeat-containing protein, at 339,326 to 341,674
15247
mRNA_6880: 15248 - K00641 metX homoserine O-acetyltransferase, at 342,593 to 344,205
15248
mRNA_6881: 15249 - Hypothetical Protein, at 344,637 to 347,114
15249
Group
Condition
mRNA
_6877
mRNA
_6878
mRNA
_6879
mRNA
_6880
mRNA
_6881
15245
15246
15247
15248
15249
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
-0.6
-0.9
-1.9
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.2
+0.0
-2.4
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
+0.2
-2.4
+0.0
auxotrophy
YNB Glucose
+0.2
+0.4
-0.3
-2.3
+0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.0
-0.1
-2.0
+0.0
growth on oleic acid
YNB Glucose
-0.3
-0.0
-0.1
-1.5
+0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.2
+0.2
-2.2
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.7
-1.4
-0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.1
+0.4
-1.9
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.1
-0.3
-1.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.8
-0.7
+0.1
+0.1
growth on oleic acid
YNB Oleic Acid
-0.2
+0.2
-0.2
-0.4
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.1
+0.0
-0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.0
-0.5
-0.1
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.0
-0.3
-0.0
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
-0.0
-0.1
+0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.7
-0.5
-0.0
-0.3
+0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
+0.2
+0.1
+0.0
auxotrophy
Dropout Complete
+0.0
-0.0
-0.1
+0.3
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
+0.3
-0.7
+1.2
-0.1
growth on ypd
YPD
-0.1
+0.2
+0.1
+0.3
+0.1
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