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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15260 and 15261 are separated by 325 nucleotides
15261 and 15262 are separated by 1663 nucleotides
15262 and 15263 are separated by 247 nucleotides
15263 and 15264 are separated by 1353 nucleotides
mRNA_6892: 15260 - Hypothetical Protein, at 371,213 to 372,518
15260
mRNA_6893: 15261 - Hypothetical Protein, at 372,844 to 373,603
15261
mRNA_6894: 15262 - K14326 UPF1, RENT1 regulator of nonsense transcripts 1, at 375,267 to 378,241
15262
mRNA_6895: 15263 - K18183 COX19 cytochrome c oxidase assembly protein subunit 19, at 378,489 to 378,951
15263
mRNA_6896: 15264 - KOG1399 Flavin-containing monooxygenase, at 380,305 to 381,908
15264
Group
Condition
mRNA
_6892
mRNA
_6893
mRNA
_6894
mRNA
_6895
mRNA
_6896
15260
15261
15262
15263
15264
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
-0.4
N.D.
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.3
N.D.
N.D.
+0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.2
N.D.
N.D.
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+0.8
N.D.
N.D.
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-0.5
N.D.
N.D.
+0.1
auxotrophy
YNB Glucose
+0.3
-0.3
N.D.
N.D.
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.3
-0.1
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.3
N.D.
N.D.
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.2
N.D.
N.D.
+0.0
auxotrophy
Dropout Complete
+0.3
+0.1
N.D.
N.D.
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
+0.0
N.D.
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.0
N.D.
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.1
N.D.
N.D.
+0.5
growth on ricinoleic acid
YNB Glucose
+0.0
+0.3
N.D.
N.D.
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.4
N.D.
N.D.
+0.2
growth on oleic acid
YNB Oleic Acid
+0.2
+0.3
N.D.
N.D.
+0.4
growth on oleic acid
YNB Glucose
-0.0
+0.5
N.D.
N.D.
+0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
+0.2
N.D.
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
+0.6
N.D.
N.D.
+0.1
growth on ypd
YPD
+0.4
-0.2
N.D.
N.D.
+0.8
ypd buoyancy
40 hrs High Buoyancy
+0.4
+0.7
N.D.
N.D.
+0.2
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