Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15266 and 15267 are separated by 301 nucleotides
15267 and 15268 are separated by 561 nucleotides
15268 and 15269 are separated by 290 nucleotides
15269 and 15270 are separated by 124 nucleotides
mRNA_6898: 15266 - HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,SUPERFAMILY--SSF52833, at 383,747 to 384,768
15266
mRNA_6899: 15267 - K01130 E3.1.6.1, aslA arylsulfatase, at 385,070 to 387,138
15267
mRNA_6900: 15268 - KOG0254 Predicted transporter (major facilitator superfamily), at 387,700 to 389,910
15268
mRNA_6901: 15269 - HMMPfam-DASH complex subunit Dad2-PF08654, at 390,201 to 390,814
15269
mRNA_6902: 15270 - HMMPfam-Fungal family of unknown function (DUF1776)-PF08643,SUPERFAMILY--SSF51735, at 390,939 to 393,309
15270
Group
Condition
mRNA
_6898
mRNA
_6899
mRNA
_6900
mRNA
_6901
mRNA
_6902
15266
15267
15268
15269
15270
auxotrophy
Dropout Complete
-0.6
+0.3
-0.1
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.3
-0.0
N.D.
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
-0.8
-0.3
N.D.
+0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.2
-0.3
N.D.
-0.2
growth on oleic acid
YNB Oleic Acid
-0.3
+0.7
-0.5
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
-0.2
+0.4
+0.1
N.D.
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
+0.5
+0.1
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.4
-0.7
+0.2
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.6
+0.1
N.D.
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.3
-0.1
N.D.
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+0.4
+0.3
N.D.
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.4
-0.0
+0.1
N.D.
-0.1
auxotrophy
YNB Glucose
-0.1
+0.3
+0.1
N.D.
+0.0
growth on ypd
YPD
-0.2
+0.4
-0.0
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.4
+0.1
+0.2
N.D.
-0.2
growth on oleic acid
YNB Glucose
+0.1
+0.1
+0.1
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.2
+0.2
N.D.
+0.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.1
+0.2
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.3
-0.0
N.D.
+0.8
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.2
+0.3
N.D.
+0.3
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
+0.2
-0.6
N.D.
+0.9
remove
mRNA_6898
plot
remove
mRNA_6899
plot
remove
mRNA_6900
remove
mRNA_6901
plot
remove
mRNA_6902
plot