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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15267 and 15268 are separated by 561 nucleotides
15268 and 15269 are separated by 290 nucleotides
15269 and 15270 are separated by 124 nucleotides
15270 and 15271 are separated by 434 nucleotides
mRNA_6899: 15267 - K01130 E3.1.6.1, aslA arylsulfatase, at 385,070 to 387,138
15267
mRNA_6900: 15268 - KOG0254 Predicted transporter (major facilitator superfamily), at 387,700 to 389,910
15268
mRNA_6901: 15269 - HMMPfam-DASH complex subunit Dad2-PF08654, at 390,201 to 390,814
15269
mRNA_6902: 15270 - HMMPfam-Fungal family of unknown function (DUF1776)-PF08643,SUPERFAMILY--SSF51735, at 390,939 to 393,309
15270
mRNA_6903: 15271 - Hypothetical Protein, at 393,744 to 394,954
15271
Group
Condition
mRNA
_6899
mRNA
_6900
mRNA
_6901
mRNA
_6902
mRNA
_6903
15267
15268
15269
15270
15271
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.0
N.D.
-0.7
-0.5
auxotrophy
Dropout Complete
+0.3
-0.1
N.D.
-0.2
-0.4
ypd buoyancy
40 hrs High Buoyancy
+0.3
-0.1
N.D.
-0.0
-0.5
growth on ypd
YPD
+0.4
-0.0
N.D.
+0.3
-0.8
auxotrophy
YNB Glucose 75mM Arginine
+0.6
+0.1
N.D.
-0.3
-0.5
auxotrophy
YNB Glucose
+0.3
+0.1
N.D.
+0.0
-0.6
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.2
N.D.
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
-0.3
N.D.
+0.3
+0.8
growth on ricinoleic acid
YNB Glucose
+0.4
+0.1
N.D.
-0.5
+0.0
growth on oleic acid
YNB Oleic Acid
+0.7
-0.5
N.D.
-0.1
+0.1
growth on oleic acid
YNB Glucose
+0.1
+0.1
N.D.
+0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
+0.1
N.D.
-0.1
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.3
N.D.
-0.2
+0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.3
N.D.
+0.3
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.7
+0.2
N.D.
+0.2
+0.6
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.6
N.D.
+0.9
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
+0.3
N.D.
-0.4
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.2
N.D.
+0.3
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.5
+0.1
N.D.
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
+0.2
N.D.
+0.4
+0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.0
N.D.
+0.8
+1.1
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