Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15268 and 15269 are separated by 290 nucleotides
15269 and 15270 are separated by 124 nucleotides
15270 and 15271 are separated by 434 nucleotides
15271 and 15272 are separated by 227 nucleotides
mRNA_6900: 15268 - KOG0254 Predicted transporter (major facilitator superfamily), at 387,700 to 389,910
15268
mRNA_6901: 15269 - HMMPfam-DASH complex subunit Dad2-PF08654, at 390,201 to 390,814
15269
mRNA_6902: 15270 - HMMPfam-Fungal family of unknown function (DUF1776)-PF08643,SUPERFAMILY--SSF51735, at 390,939 to 393,309
15270
mRNA_6903: 15271 - Hypothetical Protein, at 393,744 to 394,954
15271
mRNA_6904: 15272 - HMMPfam-CTLH/CRA C-terminal to LisH motif domain-PF10607,ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896,SMART-CT11-RanBPM-SM00757, at 395,182 to 396,886
15272
Group
Condition
mRNA
_6900
mRNA
_6901
mRNA
_6902
mRNA
_6903
mRNA
_6904
15268
15269
15270
15271
15272
auxotrophy
YNB Glucose 75mM Methionine
-0.0
N.D.
-0.7
-0.5
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
-0.0
-0.5
-0.0
growth on oleic acid
YNB Oleic Acid
-0.5
N.D.
-0.1
+0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.1
N.D.
-0.3
-0.5
+0.2
growth on ricinoleic acid
YNB Glucose
+0.1
N.D.
-0.5
+0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
N.D.
-0.2
+0.5
-0.4
auxotrophy
Dropout Complete
-0.1
N.D.
-0.2
-0.4
+0.5
auxotrophy
YNB Glucose
+0.1
N.D.
+0.0
-0.6
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
N.D.
-0.4
+0.2
-0.2
growth on ypd
YPD
-0.0
N.D.
+0.3
-0.8
+0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
-0.2
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
N.D.
-0.2
+0.3
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
N.D.
+0.9
-0.1
-0.1
growth on oleic acid
YNB Glucose
+0.1
N.D.
+0.2
-0.3
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.3
N.D.
+0.3
-0.5
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
N.D.
+0.3
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
N.D.
+0.3
+0.8
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
-0.1
+0.2
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
N.D.
+0.4
+0.6
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
N.D.
+0.2
+0.6
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
N.D.
+0.8
+1.1
-0.2
remove
mRNA_6900
plot
remove
mRNA_6901
plot
remove
mRNA_6902
remove
mRNA_6903
plot
remove
mRNA_6904
plot