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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15269 and 15270 are separated by 124 nucleotides
15270 and 15271 are separated by 434 nucleotides
15271 and 15272 are separated by 227 nucleotides
15272 and 15273 are separated by 235 nucleotides
mRNA_6901: 15269 - HMMPfam-DASH complex subunit Dad2-PF08654, at 390,201 to 390,814
15269
mRNA_6902: 15270 - HMMPfam-Fungal family of unknown function (DUF1776)-PF08643,SUPERFAMILY--SSF51735, at 390,939 to 393,309
15270
mRNA_6903: 15271 - Hypothetical Protein, at 393,744 to 394,954
15271
mRNA_6904: 15272 - HMMPfam-CTLH/CRA C-terminal to LisH motif domain-PF10607,ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896,SMART-CT11-RanBPM-SM00757, at 395,182 to 396,886
15272
mRNA_6905: 15273 - K14300 NUP133 nuclear pore complex protein Nup133, at 397,122 to 402,305
15273
Group
Condition
mRNA
_6901
mRNA
_6902
mRNA
_6903
mRNA
_6904
mRNA
_6905
15269
15270
15271
15272
15273
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.2
+0.5
-0.4
-2.0
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.7
-0.5
+0.3
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
+0.3
+0.1
-0.3
-1.9
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.1
+0.2
+0.3
-2.1
growth on ricinoleic acid
YNB Glucose
N.D.
-0.5
+0.0
-0.1
-0.9
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
-0.4
+0.2
-0.2
-1.1
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.3
-0.5
+0.2
-0.7
auxotrophy
YNB Glucose
N.D.
+0.0
-0.6
+0.1
-0.5
auxotrophy
Dropout Complete
N.D.
-0.2
-0.4
+0.5
-0.6
growth on oleic acid
YNB Glucose
N.D.
+0.2
-0.3
+0.2
-0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.2
+0.6
+0.1
-1.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.2
+0.3
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.3
+0.8
-0.3
-0.7
growth on oleic acid
YNB Oleic Acid
N.D.
-0.1
+0.1
-0.0
+0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.3
-0.5
+0.2
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.9
-0.1
-0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.0
-0.5
-0.0
+1.0
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-0.2
-0.1
+0.1
+0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.4
+0.6
-0.4
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.8
+1.1
-0.2
-0.9
growth on ypd
YPD
N.D.
+0.3
-0.8
+0.5
+1.6
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