Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15272 and 15273 are separated by 235 nucleotides
15273 and 15274 are separated by 346 nucleotides
15274 and 15275 are separated by 159 nucleotides
15275 and 15276 are separated by 570 nucleotides
mRNA_6904: 15272 - HMMPfam-CTLH/CRA C-terminal to LisH motif domain-PF10607,ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896,SMART-CT11-RanBPM-SM00757, at 395,182 to 396,886
15272
mRNA_6905: 15273 - K14300 NUP133 nuclear pore complex protein Nup133, at 397,122 to 402,305
15273
mRNA_6906: 15274 - Hypothetical Protein, at 402,652 to 403,078
15274
mRNA_6907: 15275 - K14016 UFD1 ubiquitin fusion degradation protein 1, at 403,238 to 404,908
15275
mRNA_6908: 15276 - K01907 AACS, acsA acetoacetyl-CoA synthetase, at 405,479 to 408,297
15276
Group
Condition
mRNA
_6904
mRNA
_6905
mRNA
_6906
mRNA
_6907
mRNA
_6908
15272
15273
15274
15275
15276
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-2.0
N.D.
N.D.
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-1.9
N.D.
N.D.
+0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-1.1
N.D.
N.D.
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.3
-2.1
N.D.
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.9
N.D.
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-1.2
N.D.
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
-0.7
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
-0.9
N.D.
N.D.
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.3
N.D.
N.D.
-0.5
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.7
N.D.
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.8
N.D.
N.D.
-0.2
auxotrophy
YNB Glucose
+0.1
-0.5
N.D.
N.D.
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.3
N.D.
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
+0.1
N.D.
N.D.
-0.0
growth on oleic acid
YNB Glucose
+0.2
-0.7
N.D.
N.D.
+0.2
auxotrophy
Dropout Complete
+0.5
-0.6
N.D.
N.D.
-0.1
growth on oleic acid
YNB Oleic Acid
-0.0
+0.3
N.D.
N.D.
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.4
N.D.
N.D.
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.1
+0.9
N.D.
N.D.
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
+1.0
N.D.
N.D.
-0.2
growth on ypd
YPD
+0.5
+1.6
N.D.
N.D.
-0.3
remove
mRNA_6904
plot
remove
mRNA_6905
plot
remove
mRNA_6906
remove
mRNA_6907
plot
remove
mRNA_6908
plot