Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15272 and 15273 are separated by 235 nucleotides15273 and 15274 are separated by 346 nucleotides15274 and 15275 are separated by 159 nucleotides15275 and 15276 are separated by 570 nucleotides mRNA_6904: 15272 - HMMPfam-CTLH/CRA C-terminal to LisH motif domain-PF10607,ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896,SMART-CT11-RanBPM-SM00757, at 395,182 to 396,886 15272 mRNA_6905: 15273 - K14300 NUP133 nuclear pore complex protein Nup133, at 397,122 to 402,305 15273 mRNA_6906: 15274 - Hypothetical Protein, at 402,652 to 403,078 15274 mRNA_6907: 15275 - K14016 UFD1 ubiquitin fusion degradation protein 1, at 403,238 to 404,908 15275 mRNA_6908: 15276 - K01907 AACS, acsA acetoacetyl-CoA synthetase, at 405,479 to 408,297 15276
Group Condition mRNA_6904 mRNA_6905 mRNA_6906 mRNA_6907 mRNA_6908
15272 15273 15274 15275 15276
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -2.0 N.D. N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -1.9 N.D. N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -1.1 N.D. N.D. -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -2.1 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.9 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -1.2 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.7 N.D. N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.9 N.D. N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.3 N.D. N.D. -0.5
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.7 N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.8 N.D. N.D. -0.2
auxotrophy YNB Glucose +0.1 -0.5 N.D. N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.1 N.D. N.D. -0.0
growth on oleic acid YNB Glucose +0.2 -0.7 N.D. N.D. +0.2
auxotrophy Dropout Complete +0.5 -0.6 N.D. N.D. -0.1
growth on oleic acid YNB Oleic Acid -0.0 +0.3 N.D. N.D. -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.4 N.D. N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.9 N.D. N.D. -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 +1.0 N.D. N.D. -0.2
growth on ypd YPD +0.5 +1.6 N.D. N.D. -0.3
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