Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15274 and 15275 are separated by 159 nucleotides15275 and 15276 are separated by 570 nucleotides15276 and 15277 are separated by 231 nucleotides15277 and 15278 are separated by 337 nucleotides mRNA_6906: 15274 - Hypothetical Protein, at 402,652 to 403,078 15274 mRNA_6907: 15275 - K14016 UFD1 ubiquitin fusion degradation protein 1, at 403,238 to 404,908 15275 mRNA_6908: 15276 - K01907 AACS, acsA acetoacetyl-CoA synthetase, at 405,479 to 408,297 15276 mRNA_6909: 15277 - K14315 NDC1, TMEM48 nucleoporin NDC1, at 408,529 to 411,391 15277 mRNA_6910: 15278 - KOG2287 Galactosyltransferases, at 411,729 to 414,888 15278
Group Condition mRNA_6906 mRNA_6907 mRNA_6908 mRNA_6909 mRNA_6910
15274 15275 15276 15277 15278
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. -0.2 -0.5 N.D.
growth on ricinoleic acid YNB Glucose N.D. N.D. +0.1 -0.8 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.2 -0.5 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.3 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. -0.0 -0.3 N.D.
auxotrophy YNB Glucose N.D. N.D. -0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.1 -0.2 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.2 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.2 -0.1 N.D.
auxotrophy Dropout Complete N.D. N.D. -0.1 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.5 +0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. +0.0 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.1 -0.0 N.D.
growth on ypd YPD N.D. N.D. -0.3 +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. +0.2 -0.3 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. +0.0 +0.0 N.D.
growth on oleic acid YNB Oleic Acid N.D. N.D. -0.0 +0.1 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. -0.2 +0.2 N.D.
growth on oleic acid YNB Glucose N.D. N.D. +0.2 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.0 +0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. +0.3 +0.1 N.D.
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