Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15275 and 15276 are separated by 570 nucleotides15276 and 15277 are separated by 231 nucleotides15277 and 15278 are separated by 337 nucleotides15278 and 15279 are separated by 660 nucleotides mRNA_6907: 15275 - K14016 UFD1 ubiquitin fusion degradation protein 1, at 403,238 to 404,908 15275 mRNA_6908: 15276 - K01907 AACS, acsA acetoacetyl-CoA synthetase, at 405,479 to 408,297 15276 mRNA_6909: 15277 - K14315 NDC1, TMEM48 nucleoporin NDC1, at 408,529 to 411,391 15277 mRNA_6910: 15278 - KOG2287 Galactosyltransferases, at 411,729 to 414,888 15278 mRNA_6911: 15279 - K03660 OGG1 N-glycosylase/DNA lyase, at 415,549 to 417,203 15279
Group Condition mRNA_6907 mRNA_6908 mRNA_6909 mRNA_6910 mRNA_6911
15275 15276 15277 15278 15279
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 -0.5 N.D. -0.3
growth on ricinoleic acid YNB Glucose N.D. +0.1 -0.8 N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.3 -0.4 N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 -0.5 N.D. +0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 +0.3 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 -0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 -0.3 N.D. +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 -0.1 N.D. +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.0 -0.2 N.D. -0.0
auxotrophy YNB Glucose N.D. -0.1 -0.3 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.2 N.D. +0.1
growth on oleic acid YNB Oleic Acid N.D. -0.0 +0.1 N.D. -0.2
growth on ypd YPD N.D. -0.3 +0.2 N.D. -0.1
auxotrophy Dropout Complete N.D. -0.1 -0.2 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.2 -0.3 N.D. +0.1
growth on oleic acid YNB Glucose N.D. +0.2 +0.0 N.D. -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.2 +0.2 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.0 +0.3 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.3 +0.1 N.D. -0.2
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.0 +0.0 N.D. +0.3
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