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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15286 and 15287 are separated by 252 nucleotides
15287 and 15288 are separated by 584 nucleotides
15288 and 15289 are separated by 1193 nucleotides
15289 and 15290 are separated by 120 nucleotides
mRNA_6918: 15286 - HMMPfam-Coiled-coil domain-containing protein 56-PF09813, at 430,003 to 430,506
15286
mRNA_6919: 15287 - K07556 ATPeAF2, ATPAF2, ATP12 ATP synthase mitochondrial F1 complex assembly factor 2, at 430,759 to 431,959
15287
mRNA_6920: 15288 - BLAST GTP binding protein 2 [Moniliophthora roreri MCA ..., at 432,544 to 434,015
15288
mRNA_6921: 15289 - Hypothetical Protein, at 435,209 to 436,044
15289
mRNA_6922: 15290 - KOG4121 Nuclear pore complex, Nup133 component (sc Nup133), at 436,165 to 438,557
15290
Group
Condition
mRNA
_6918
mRNA
_6919
mRNA
_6920
mRNA
_6921
mRNA
_6922
15286
15287
15288
15289
15290
growth on oleic acid
YNB Glucose
N.D.
N.D.
-0.2
-0.3
-0.2
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
-0.3
-0.3
-0.0
auxotrophy
Dropout Complete
N.D.
N.D.
-0.2
-0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
-0.4
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.1
-0.3
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
+0.2
-0.2
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
+0.1
+0.2
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.2
-0.1
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
+0.3
-0.1
-0.5
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
-0.2
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
-0.1
-0.1
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
+0.3
-0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
-0.0
+0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
-0.1
-0.1
+0.1
auxotrophy
YNB Glucose
N.D.
N.D.
-0.1
-0.0
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.2
+0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.0
+0.1
+0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
+0.1
+0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
+0.2
-0.0
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
+0.4
+0.0
+0.1
growth on ypd
YPD
N.D.
N.D.
+0.5
+0.1
+0.4
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