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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15292 and 15293 are separated by 521 nucleotides
15293 and 15294 are separated by 176 nucleotides
15294 and 15295 are separated by 234 nucleotides
15295 and 15296 are separated by 552 nucleotides
mRNA_6924: 15292 - BLAST PC-Esterase [Xanthophyllomyces dendrorhous], at 444,538 to 446,309
15292
mRNA_6925: 15293 - K02331 POL5, MYBBP1A DNA polymerase phi, at 446,831 to 450,905
15293
mRNA_6926: 15294 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 451,082 to 452,962
15294
mRNA_6927: 15295 - Hypothetical Protein, at 453,197 to 455,324
15295
mRNA_6928: 15296 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 455,877 to 456,215
15296
Group
Condition
mRNA
_6924
mRNA
_6925
mRNA
_6926
mRNA
_6927
mRNA
_6928
15292
15293
15294
15295
15296
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
N.D.
-1.0
-2.4
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
N.D.
-1.5
-0.4
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
N.D.
-2.0
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
N.D.
-1.1
-0.5
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
N.D.
-1.5
+0.2
N.D.
growth on ypd
YPD
-0.1
N.D.
-0.4
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
N.D.
-0.4
-0.2
N.D.
auxotrophy
Dropout Complete
+0.4
N.D.
-1.1
+0.2
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
N.D.
+0.1
-0.3
N.D.
growth on ricinoleic acid
YNB Glucose
-0.1
N.D.
-0.2
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Methionine
+0.1
N.D.
-0.5
+0.2
N.D.
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
-0.4
+0.0
N.D.
growth on oleic acid
YNB Oleic Acid
-0.2
N.D.
+0.1
-0.0
N.D.
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
-0.2
+0.1
N.D.
auxotrophy
YNB Glucose
+0.5
N.D.
-0.4
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
N.D.
-0.0
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.4
N.D.
+0.8
-0.4
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.3
N.D.
+0.5
+0.1
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.3
N.D.
+0.2
+0.3
N.D.
growth on oleic acid
YNB Glucose
-0.3
N.D.
+1.1
+0.2
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
N.D.
+0.7
+0.2
N.D.
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