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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15294 and 15295 are separated by 234 nucleotides
15295 and 15296 are separated by 552 nucleotides
15296 and 15297 are separated by 1729 nucleotides
15297 and 15298 are separated by 1554 nucleotides
mRNA_6926: 15294 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 451,082 to 452,962
15294
mRNA_6927: 15295 - Hypothetical Protein, at 453,197 to 455,324
15295
mRNA_6928: 15296 - HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685, at 455,877 to 456,215
15296
mRNA_6929: 15297 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 457,945 to 459,975
15297
mRNA_6930: 15298 - Hypothetical Protein, at 461,530 to 462,565
15298
Group
Condition
mRNA
_6926
mRNA
_6927
mRNA
_6928
mRNA
_6929
mRNA
_6930
15294
15295
15296
15297
15298
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
-2.4
N.D.
+0.4
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-1.5
-0.4
N.D.
-0.9
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.0
+0.2
N.D.
+0.1
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.1
-0.5
N.D.
-0.2
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-1.5
+0.2
N.D.
-0.4
+0.0
auxotrophy
Dropout Complete
-1.1
+0.2
N.D.
-0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.0
N.D.
-0.6
-0.2
auxotrophy
YNB Glucose
-0.4
+0.0
N.D.
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.2
N.D.
+0.0
-0.1
growth on ypd
YPD
-0.4
-0.2
N.D.
-0.4
+0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.5
+0.2
N.D.
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.3
N.D.
+0.1
-0.2
growth on ricinoleic acid
YNB Glucose
-0.2
+0.1
N.D.
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.0
N.D.
+0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.1
N.D.
+0.0
+0.1
growth on oleic acid
YNB Oleic Acid
+0.1
-0.0
N.D.
+0.0
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
-0.4
N.D.
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.2
+0.3
N.D.
-0.4
+0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.7
+0.2
N.D.
-0.4
-0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.5
+0.1
N.D.
+0.2
-0.1
growth on oleic acid
YNB Glucose
+1.1
+0.2
N.D.
-0.2
-0.1
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