Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 15297 and 15298 are separated by 1554 nucleotides15298 and 15299 are separated by 508 nucleotides15299 and 15300 are separated by 200 nucleotides15300 and 15301 are separated by 1000 nucleotides mRNA_6929: 15297 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 457,945 to 459,975 15297 mRNA_6930: 15298 - Hypothetical Protein, at 461,530 to 462,565 15298 mRNA_6931: 15299 - KOG4844 Mitochondrial ribosomal protein S27, at 463,074 to 463,703 15299 mRNA_6932: 15300 - K00764 purF, PPAT amidophosphoribosyltransferase, at 463,904 to 466,074 15300 mRNA_6933: 15301 - KOG0810 SNARE protein Syntaxin 1 and related proteins, at 467,075 to 468,286 15301
Group Condition mRNA_6929 mRNA_6930 mRNA_6931 mRNA_6932 mRNA_6933
15297 15298 15299 15300 15301
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.1 N.D. N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine -0.6 -0.2 N.D. N.D. -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 N.D. N.D. -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 N.D. N.D. -0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -0.4 N.D. N.D. -0.7
auxotrophy Dropout Complete -0.3 -0.3 N.D. N.D. +0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.2 N.D. N.D. -0.4
growth on oleic acid YNB Glucose -0.2 -0.1 N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 N.D. N.D. -0.4
growth on ypd YPD -0.4 +0.4 N.D. N.D. -0.6
growth on oleic acid YNB Oleic Acid +0.0 +0.0 N.D. N.D. -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.0 N.D. N.D. +0.0
auxotrophy YNB Glucose -0.2 -0.1 N.D. N.D. +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.2 N.D. N.D. -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 N.D. N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy +0.0 +0.1 N.D. N.D. -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.1 N.D. N.D. +0.6
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.1 N.D. N.D. +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.1 N.D. N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.0 N.D. N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 N.D. N.D. +0.3
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