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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15298 and 15299 are separated by 508 nucleotides
15299 and 15300 are separated by 200 nucleotides
15300 and 15301 are separated by 1000 nucleotides
15301 and 15302 are separated by 180 nucleotides
mRNA_6930: 15298 - Hypothetical Protein, at 461,530 to 462,565
15298
mRNA_6931: 15299 - KOG4844 Mitochondrial ribosomal protein S27, at 463,074 to 463,703
15299
mRNA_6932: 15300 - K00764 purF, PPAT amidophosphoribosyltransferase, at 463,904 to 466,074
15300
mRNA_6933: 15301 - KOG0810 SNARE protein Syntaxin 1 and related proteins, at 467,075 to 468,286
15301
mRNA_6934: 15302 - K12871 CCDC12 coiled-coil domain-containing protein 12, at 468,467 to 469,312
15302
Group
Condition
mRNA
_6930
mRNA
_6931
mRNA
_6932
mRNA
_6933
mRNA
_6934
15298
15299
15300
15301
15302
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
N.D.
N.D.
+0.0
-1.6
growth on oleic acid
YNB Oleic Acid
+0.0
N.D.
N.D.
-0.5
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
N.D.
N.D.
-0.2
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
N.D.
N.D.
-0.7
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
N.D.
N.D.
+0.3
-0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
N.D.
N.D.
-0.6
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
N.D.
N.D.
+0.6
-1.0
growth on oleic acid
YNB Glucose
-0.1
N.D.
N.D.
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
N.D.
N.D.
-0.4
+0.1
auxotrophy
Dropout Complete
-0.3
N.D.
N.D.
+0.0
-0.0
growth on ricinoleic acid
YNB Glucose
-0.2
N.D.
N.D.
-0.4
+0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.2
N.D.
N.D.
-0.0
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
N.D.
-0.1
+0.0
auxotrophy
YNB Glucose
-0.1
N.D.
N.D.
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
N.D.
N.D.
-0.3
+0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
N.D.
N.D.
-0.6
+0.9
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
N.D.
+0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
N.D.
N.D.
+0.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
N.D.
N.D.
+0.0
+0.5
growth on ypd
YPD
+0.4
N.D.
N.D.
-0.6
+0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
N.D.
N.D.
+0.3
+0.4
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