Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
15301 and 15302 are separated by 180 nucleotides
15302 and 15303 are separated by 111 nucleotides
15303 and 15304 are separated by 98 nucleotides
15304 and 15305 are separated by 585 nucleotides
mRNA_6933: 15301 - KOG0810 SNARE protein Syntaxin 1 and related proteins, at 467,075 to 468,286
15301
mRNA_6934: 15302 - K12871 CCDC12 coiled-coil domain-containing protein 12, at 468,467 to 469,312
15302
mRNA_6935: 15303 - K12830 SF3B3, SAP130, RSE1 splicing factor 3B subunit 3, at 469,424 to 473,834
15303
mRNA_6936: 15304 - K09669 FUT10 alpha-1,3-fucosyltransferase 10, at 473,933 to 475,521
15304
mRNA_6937: 15305 - K03781 katE, CAT, catB, srpA catalase, at 476,107 to 478,851
15305
Group
Condition
mRNA
_6933
mRNA
_6934
mRNA
_6935
mRNA
_6936
mRNA
_6937
15301
15302
15303
15304
15305
growth on oleic acid
YNB Oleic Acid
-0.5
-0.7
N.D.
-0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-1.6
N.D.
+0.3
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
-0.8
N.D.
-0.5
-0.2
growth on ricinoleic acid
YNB Glucose
-0.4
+0.3
N.D.
-0.5
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
+0.1
N.D.
-0.4
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.7
N.D.
+0.1
+0.2
growth on oleic acid
YNB Glucose
-0.3
-0.1
N.D.
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
+0.9
N.D.
-0.6
+0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
+0.3
N.D.
-0.3
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
+0.6
N.D.
-0.5
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.4
N.D.
-0.5
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.6
-1.0
N.D.
+0.3
+0.2
auxotrophy
Dropout Complete
+0.0
-0.0
N.D.
+0.2
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.0
N.D.
+0.2
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
+0.3
N.D.
+0.6
+0.1
auxotrophy
YNB Glucose
+0.0
+0.2
N.D.
+0.3
-0.2
growth on ypd
YPD
-0.6
+0.7
N.D.
+0.5
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.2
N.D.
+0.4
-0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.5
N.D.
+0.3
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.3
+0.2
N.D.
+0.1
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.2
N.D.
+0.3
+0.3
remove
mRNA_6933
plot
remove
mRNA_6934
plot
remove
mRNA_6935
remove
mRNA_6936
plot
remove
mRNA_6937
plot