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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
15302 and 15303 are separated by 111 nucleotides
15303 and 15304 are separated by 98 nucleotides
15304 and 15305 are separated by 585 nucleotides
15305 and 15306 are separated by 113 nucleotides
mRNA_6934: 15302 - K12871 CCDC12 coiled-coil domain-containing protein 12, at 468,467 to 469,312
15302
mRNA_6935: 15303 - K12830 SF3B3, SAP130, RSE1 splicing factor 3B subunit 3, at 469,424 to 473,834
15303
mRNA_6936: 15304 - K09669 FUT10 alpha-1,3-fucosyltransferase 10, at 473,933 to 475,521
15304
mRNA_6937: 15305 - K03781 katE, CAT, catB, srpA catalase, at 476,107 to 478,851
15305
mRNA_6938: 15306 - SUPERFAMILY--SSF56801, at 478,965 to 480,801
15306
Group
Condition
mRNA
_6934
mRNA
_6935
mRNA
_6936
mRNA
_6937
mRNA
_6938
15302
15303
15304
15305
15306
facs on lipid accumulation
Sorted High BODIPY Gate
-1.6
N.D.
+0.3
-0.3
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
N.D.
-0.4
+0.1
-1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.8
N.D.
-0.5
-0.2
+0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.0
N.D.
+0.3
+0.2
-0.5
growth on oleic acid
YNB Oleic Acid
-0.7
N.D.
-0.1
-0.3
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.6
N.D.
-0.5
+0.1
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
N.D.
-0.5
-0.2
-0.3
growth on ricinoleic acid
YNB Glucose
+0.3
N.D.
-0.5
-0.2
+0.0
growth on oleic acid
YNB Glucose
-0.1
N.D.
-0.2
-0.0
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.7
N.D.
+0.1
+0.2
+0.3
auxotrophy
Dropout Complete
-0.0
N.D.
+0.2
-0.0
-0.2
growth on ypd
YPD
+0.7
N.D.
+0.5
-0.1
-1.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
N.D.
-0.3
+0.3
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.9
N.D.
-0.6
+0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
N.D.
+0.3
+0.3
-0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.5
N.D.
+0.3
-0.2
-0.5
ypd buoyancy
40 hrs Low Buoyancy
+0.0
N.D.
+0.2
+0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
+0.4
-0.0
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.3
N.D.
+0.6
+0.1
-0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.2
N.D.
+0.1
+0.1
+0.2
auxotrophy
YNB Glucose
+0.2
N.D.
+0.3
-0.2
+0.3
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