Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15305 and 15306 are separated by 113 nucleotides15306 and 15307 are separated by 175 nucleotides15307 and 15308 are separated by 68 nucleotides15308 and 15309 are separated by 346 nucleotides mRNA_6937: 15305 - K03781 katE, CAT, catB, srpA catalase, at 476,107 to 478,851 15305 mRNA_6938: 15306 - SUPERFAMILY--SSF56801, at 478,965 to 480,801 15306 mRNA_6939: 15307 - K17973 NAA25, MDM20 N-terminal acetyltransferase B complex non-catalytic subunit, at 480,977 to 484,798 15307 mRNA_6940: 15308 - KOG2816 Predicted transporter ADD1 (major facilitator superfamily), at 484,867 to 487,020 15308 mRNA_6941: 15309 - K02154 ATPeV0A, ATP6N V-type H+-transporting ATPase subunit a, at 487,367 to 491,016 15309
Group Condition mRNA_6937 mRNA_6938 mRNA_6939 mRNA_6940 mRNA_6941
15305 15306 15307 15308 15309
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -1.0 N.D. -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.7 N.D. -0.1 N.D.
growth on ypd YPD -0.1 -1.1 N.D. +0.4 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.5 N.D. -0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.5 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 N.D. -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.3 N.D. -0.2 N.D.
auxotrophy Dropout Complete -0.0 -0.2 N.D. -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.1 N.D. -0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.5 N.D. +0.1 N.D.
auxotrophy YNB Glucose -0.2 +0.3 N.D. -0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.3 +0.3 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.3 N.D. -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.1 N.D. +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 N.D. +0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.0 N.D. +0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.3 N.D. -0.4 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.3 N.D. +0.2 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.4 N.D. +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 N.D. -0.1 N.D.
growth on oleic acid YNB Glucose -0.0 +0.1 N.D. +0.4 N.D.
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