Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15306 and 15307 are separated by 175 nucleotides15307 and 15308 are separated by 68 nucleotides15308 and 15309 are separated by 346 nucleotides15309 and 15310 are separated by 127 nucleotides mRNA_6938: 15306 - SUPERFAMILY--SSF56801, at 478,965 to 480,801 15306 mRNA_6939: 15307 - K17973 NAA25, MDM20 N-terminal acetyltransferase B complex non-catalytic subunit, at 480,977 to 484,798 15307 mRNA_6940: 15308 - KOG2816 Predicted transporter ADD1 (major facilitator superfamily), at 484,867 to 487,020 15308 mRNA_6941: 15309 - K02154 ATPeV0A, ATP6N V-type H+-transporting ATPase subunit a, at 487,367 to 491,016 15309 mRNA_6942: 15310 - K15029 EIF3L translation initiation factor 3 subunit L, at 491,144 to 493,608 15310
Group Condition mRNA_6938 mRNA_6939 mRNA_6940 mRNA_6941 mRNA_6942
15306 15307 15308 15309 15310
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 N.D. -0.1 N.D. -0.6
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. -0.0 N.D. -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 N.D. +0.1 N.D. -0.7
growth on ricinoleic acid YNB Glucose +0.0 N.D. +0.2 N.D. -1.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.0 N.D. -0.3 N.D. +0.3
auxotrophy Dropout Complete -0.2 N.D. -0.1 N.D. -0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. +0.1 N.D. -1.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 N.D. -0.4 N.D. +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.3 N.D. -0.4 N.D. -0.7
growth on ypd YPD -1.1 N.D. +0.4 N.D. +0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 N.D. -0.3 N.D. -0.2
growth on oleic acid YNB Glucose +0.1 N.D. +0.4 N.D. -0.9
auxotrophy YNB Glucose +0.3 N.D. -0.3 N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. -0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 N.D. -0.2 N.D. +0.4
ypd buoyancy 40 hrs High Buoyancy -0.3 N.D. +0.2 N.D. +0.4
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. -0.1 N.D. +0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 N.D. +0.0 N.D. +0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. +0.1 N.D. +1.0
growth on oleic acid YNB Oleic Acid +0.3 N.D. -0.2 N.D. +1.3
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