Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 15311 and 15312 are separated by 475 nucleotides15312 and 15313 are separated by 291 nucleotides15313 and 15314 are separated by 190 nucleotides15314 and 15315 are separated by 636 nucleotides mRNA_6943: 15311 - SUPERFAMILY--SSF52047, at 493,796 to 495,109 15311 mRNA_6944: 15312 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047, at 495,585 to 496,942 15312 mRNA_6945: 15313 - SUPERFAMILY--SSF52047, at 497,234 to 499,004 15313 mRNA_6946: 15314 - K04713 SUR2 sphinganine C4-monooxygenase, at 499,195 to 500,447 15314 mRNA_6947: 15315 - K02555 MIH1 M-phase inducer tyrosine phosphatase, at 501,084 to 504,114 15315
Group Condition mRNA_6943 mRNA_6944 mRNA_6945 mRNA_6946 mRNA_6947
15311 15312 15313 15314 15315
ypd buoyancy 40 hrs No Buoyancy Separation -1.7 +0.0 +0.2 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.9 -0.1 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.8 -0.2 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.5 -0.2 N.D. N.D.
auxotrophy Dropout Complete -0.3 -0.1 -0.2 N.D. N.D.
auxotrophy YNB Glucose -0.5 -0.2 -0.0 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 -0.2 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.7 +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.0 +0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 +0.0 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.6 +0.4 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.2 -0.2 +0.1 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.3 -0.1 N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 +0.2 -0.0 N.D. N.D.
growth on oleic acid YNB Glucose +0.2 +0.1 +0.1 N.D. N.D.
growth on ypd YPD -0.0 +0.1 +0.2 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.5 -0.0 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.9 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.7 +0.3 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 +0.9 +0.0 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +1.1 +0.0 N.D. N.D.
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