Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 15313 and 15314 are separated by 190 nucleotides15314 and 15315 are separated by 636 nucleotides15315 and 15316 are separated by 1199 nucleotides15316 and 15317 are separated by 385 nucleotides mRNA_6945: 15313 - SUPERFAMILY--SSF52047, at 497,234 to 499,004 15313 mRNA_6946: 15314 - K04713 SUR2 sphinganine C4-monooxygenase, at 499,195 to 500,447 15314 mRNA_6947: 15315 - K02555 MIH1 M-phase inducer tyrosine phosphatase, at 501,084 to 504,114 15315 mRNA_6948: 15316 - BLAST putative ephrin type-a receptor 8-like protein [Botry..., at 505,314 to 506,461 15316 mRNA_6949: 15317 - HMMPfam-Cenp-O kinetochore centromere component-PF09496, at 506,847 to 507,636 15317
Group Condition mRNA_6945 mRNA_6946 mRNA_6947 mRNA_6948 mRNA_6949
15313 15314 15315 15316 15317
auxotrophy YNB Glucose 75mM Methionine -0.2 N.D. N.D. -0.4 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. N.D. +0.2 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 N.D. N.D. +0.2 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 N.D. N.D. +0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 N.D. N.D. +0.2 -0.5
auxotrophy Dropout Complete -0.2 N.D. N.D. -0.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 N.D. N.D. -0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 N.D. N.D. -0.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. N.D. +0.0 +0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. N.D. +0.2 -0.0
auxotrophy YNB Glucose -0.0 N.D. N.D. -0.1 +0.4
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 N.D. N.D. +0.4 -0.3
growth on oleic acid YNB Oleic Acid +0.1 N.D. N.D. +0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 N.D. N.D. +0.1 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 N.D. N.D. +0.4 +0.1
growth on oleic acid YNB Glucose +0.1 N.D. N.D. +0.5 +0.1
growth on ypd YPD +0.2 N.D. N.D. -0.0 +0.6
growth on ricinoleic acid YNB Glucose -0.0 N.D. N.D. +0.3 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 N.D. N.D. +0.3 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 N.D. N.D. +0.4 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 N.D. N.D. +0.7 +0.3
remove
mRNA_6945
plot		 remove
mRNA_6946
plot		 remove
mRNA_6947		 remove
mRNA_6948
plot		 remove
mRNA_6949
plot